HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:8.8 nTPM
HPA Brain:30.3 nTPM
GTEx:8.8 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:14.3 nTPM
Mouse:16.7 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007176
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.3
Sample id Sample description nTPM
Hippocampus
nTPM: 17.5
2529 Female, age 94, left hemisphere 22.8
2621 Female, age 67, right hemisphere 19.5
1898 Male, age 80, left hemisphere 17.9
1855 Male, age 76, left hemisphere 17.1
2148 Female, age 91, left hemisphere 14.3
1911 Female, age 85, right hemisphere 13.7
Dentate gyrus
nTPM: 16.0
2531 Female, age 67, both hemispheres 19.2
2246 Female, age 85, both hemispheres 18.2
2530 Female, age 94, left hemisphere 17.2
2010 Male, age 76, both hemispheres 15.8
2528 Male, age 74, both hemispheres 15.4
1927 Female, age 91, both hemispheres 10.2
Entorhinal gyrus
nTPM: 30.3
2613 Female, age 94, left hemisphere 40.2
2764 Male, age 80, right hemisphere 36.7
1938 Female, age 85, left hemisphere 28.5
2686 Male, age 75, right hemisphere 27.7
1787 Male, age 76, left hemisphere 27.3
2117 Female, age 91, right hemisphere 21.1
Hippocampus, CA1
nTPM: 15.5
2082 Female, age 91, right hemisphere 20.2
2527 Male, age 74, both hemispheres 17.3
2045 Male, age 76, both hemispheres 14.5
2749 Male, age 80, left hemisphere 12.9
1873 Female, age 85, both hemispheres 12.4
Hippocampus, CA2
nTPM: 17.5
2437 Female, age 94, left hemisphere 23.9
2113 Female, age 91, right hemisphere 19.6
1940 Female, age 85, left hemisphere 19.2
1892 Male, age 76, both hemispheres 16.7
2249 Male, age 74, both hemispheres 14.7
1963 Male, age 80, left hemisphere 11.2
Hippocampus, CA3
nTPM: 17.4
2861 Female, age 67, both hemispheres 22.6
2620 Female, age 94, left hemisphere 19.3
1867 Male, age 76, both hemispheres 18.1
1891 Female, age 85, both hemispheres 16.3
2436 Male, age 74, both hemispheres 14.2
2137 Male, age 80, left hemisphere 13.9
Parahippocampal cortex
nTPM: 26.4
2622 Female, age 67, right hemisphere 34.2
2532 Female, age 72, left hemisphere 32.8
2692 Male, age 74, both hemispheres 30.0
1850 Male, age 80, both hemispheres 27.8
1933 Female, age 85, both hemispheres 25.6
2245 Female, age 91, both hemispheres 25.2
2018 Male, age 76, both hemispheres 23.3
1990 Female, age 91, right hemisphere 22.9
2693 Female, age 94, both hemispheres 21.5
2250 Female, age 67, right hemisphere 20.6
Perirhinal gyrus
nTPM: 23.0
2848 Male, age 76, right hemisphere 26.1
1847 Female, age 91, left hemisphere 24.5
1794 Male, age 80, right hemisphere 23.6
1841 Female, age 85, right hemisphere 20.6
2521 Female, age 94, right hemisphere 19.8
Subiculum
nTPM: 23.8
2438 Female, age 94, left hemisphere 31.0
2619 Male, age 74, both hemispheres 26.9
1977 Female, age 85, both hemispheres 23.9
1901 Male, age 80, both hemispheres 23.3
2042 Male, age 76, both hemispheres 23.2
2729 Female, age 91, right hemisphere 14.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 19.8
Min nTPM: 4.2
Std nTPM: 2.7
Median nTPM: 8.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 19.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 18.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 18.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 18.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 17.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 17.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 14.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 14.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 14.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 13.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 13.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.3
Pig sample Sample description nTPM
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 16.4
Min nTPM: 11.8
Sample A Female 15.2
Sample B Female 11.8
Sample C Male 16.4
Sample D Male 13.6
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.9
Min nTPM: 8.8
Sample A Female 13.2
Sample B Female 12.3
Sample C Male 14.9
Sample D Male 8.8
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 15.1
Min nTPM: 9.4
Sample A Female 15.1
Sample B Female 9.4
Sample C Male 14.5
Sample D Male 14.1
Ventral hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 9.6
Sample A Female 9.9
Sample B Female 9.6
Sample C Male 18.1
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 19.3
Min nTPM: 15.5
Sample A Male 15.9
Sample B Male 16.1
Sample C Female 15.5
Sample D Female 19.3
Hippocampal formation
nTPM: 13.8
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.1
Sample A Male 12.1
Sample B Male 14.3
Sample C Female 13.0
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
70946123 Antisense, RP_050303_01_A02, Mouse strain C57BL/6J (56 days, male) 3.3

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