HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.4 nTPM
HPA Brain:37.9 nTPM
GTEx:20.4 nTPM
FANTOM5:42.8 Scaled Tags Per Million
Pig:16.9 nTPM
Mouse:11.9 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029253Antibody HPA029254
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.9
Sample id Sample description nTPM
Hippocampus
nTPM: 34.5
2529 Female, age 94, left hemisphere 42.9
1911 Female, age 85, right hemisphere 38.7
2148 Female, age 91, left hemisphere 38.2
2621 Female, age 67, right hemisphere 31.9
1855 Male, age 76, left hemisphere 28.8
1898 Male, age 80, left hemisphere 26.4
Dentate gyrus
nTPM: 32.4
2530 Female, age 94, left hemisphere 38.5
2531 Female, age 67, both hemispheres 35.9
2246 Female, age 85, both hemispheres 31.1
2528 Male, age 74, both hemispheres 30.2
2010 Male, age 76, both hemispheres 29.5
1927 Female, age 91, both hemispheres 29.0
Entorhinal gyrus
nTPM: 32.8
2117 Female, age 91, right hemisphere 42.4
2686 Male, age 75, right hemisphere 40.5
2764 Male, age 80, right hemisphere 31.8
2613 Female, age 94, left hemisphere 30.5
1938 Female, age 85, left hemisphere 27.8
1787 Male, age 76, left hemisphere 24.2
Hippocampus, CA1
nTPM: 32.4
2045 Male, age 76, both hemispheres 37.5
2527 Male, age 74, both hemispheres 35.9
2082 Female, age 91, right hemisphere 33.8
1873 Female, age 85, both hemispheres 33.5
2749 Male, age 80, left hemisphere 21.2
Hippocampus, CA2
nTPM: 32.1
2437 Female, age 94, left hemisphere 38.0
2113 Female, age 91, right hemisphere 36.1
1963 Male, age 80, left hemisphere 32.6
1940 Female, age 85, left hemisphere 31.6
2249 Male, age 74, both hemispheres 31.5
1892 Male, age 76, both hemispheres 22.9
Hippocampus, CA3
nTPM: 30.9
1891 Female, age 85, both hemispheres 42.3
2436 Male, age 74, both hemispheres 31.6
2861 Female, age 67, both hemispheres 31.2
1867 Male, age 76, both hemispheres 28.8
2620 Female, age 94, left hemisphere 27.6
2137 Male, age 80, left hemisphere 24.0
Parahippocampal cortex
nTPM: 32.0
2692 Male, age 74, both hemispheres 40.4
2532 Female, age 72, left hemisphere 34.5
2018 Male, age 76, both hemispheres 33.6
2622 Female, age 67, right hemisphere 32.4
2693 Female, age 94, both hemispheres 31.9
1850 Male, age 80, both hemispheres 31.0
1990 Female, age 91, right hemisphere 31.0
2245 Female, age 91, both hemispheres 30.4
1933 Female, age 85, both hemispheres 28.1
2250 Female, age 67, right hemisphere 27.2
Perirhinal gyrus
nTPM: 30.0
2848 Male, age 76, right hemisphere 34.3
1794 Male, age 80, right hemisphere 31.7
1841 Female, age 85, right hemisphere 30.4
2521 Female, age 94, right hemisphere 29.3
1847 Female, age 91, left hemisphere 24.3
Subiculum
nTPM: 37.9
2438 Female, age 94, left hemisphere 44.7
2042 Male, age 76, both hemispheres 40.3
2729 Female, age 91, right hemisphere 37.7
2619 Male, age 74, both hemispheres 36.1
1901 Male, age 80, both hemispheres 35.9
1977 Female, age 85, both hemispheres 32.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 48.4
Min nTPM: 6.8
Std nTPM: 7.2
Median nTPM: 19.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 48.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 43.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 39.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 38.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 38.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 37.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 36.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 35.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 34.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 33.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 33.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.8
FF:10153-102I9 76 years, female 48.2
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.9
Pig sample Sample description nTPM
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 19.2
Min nTPM: 15.5
Sample A Female 19.2
Sample B Female 16.3
Sample C Male 16.6
Sample D Male 15.5
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 18.5
Min nTPM: 12.1
Sample A Female 17.9
Sample B Female 13.5
Sample C Male 18.5
Sample D Male 12.1
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 17.4
Min nTPM: 16.0
Sample A Female 16.6
Sample B Female 16.0
Sample C Male 16.7
Sample D Male 17.4
Ventral hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 19.5
Min nTPM: 14.3
Sample A Female 15.3
Sample B Female 14.3
Sample C Male 19.5
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.6
Sample A Male 14.1
Sample B Male 10.6
Sample C Female 11.8
Sample D Female 11.1
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 15.8
Min nTPM: 9.1
Sample A Male 9.1
Sample B Male 11.8
Sample C Female 15.8
Sample D Female 10.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
70295410 Antisense, RP_050531_02_E09, Mouse strain C57BL/6J (56 days, male) 3.9

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