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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.1
nTPM
Monaco:
110.7
nTPM
Schmiedel:
440.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.1
HPA sample
nTPM
gdT-cell nTPM: 25.2
Samples: 6
Max nTPM: 32.0
Min nTPM: 19.6
P10809_1007
32.0
P10809_1022
21.7
P10809_1041
19.6
P10809_1060
20.0
P10809_1077
25.9
P10809_1098
31.7
MAIT T-cell nTPM: 32.9
Samples: 6
Max nTPM: 46.3
Min nTPM: 24.5
P10809_1006
46.3
P10809_1024
25.9
P10809_1043
24.6
P10809_1062
33.2
P10809_1083
24.5
P10809_1097
42.8
Memory CD4 T-cell nTPM: 45.5
Samples: 6
Max nTPM: 62.8
Min nTPM: 37.6
P10809_1014
62.8
P10809_1026
47.9
P10809_1045
42.9
P10809_1064
39.3
P10809_1086
37.6
P10809_1113
42.5
Memory CD8 T-cell nTPM: 39.7
Samples: 5
Max nTPM: 54.3
Min nTPM: 32.1
P10809_1012
54.3
P10809_1027
40.8
P10809_1046
32.1
P10809_1065
33.0
P10809_1111
38.1
Naive CD4 T-cell nTPM: 53.1
Samples: 6
Max nTPM: 70.4
Min nTPM: 38.4
P10809_1015
57.8
P10809_1030
38.4
P10809_1049
45.2
P10809_1068
46.2
P10809_1085
70.4
P10809_1112
60.8
Naive CD8 T-cell nTPM: 43.7
Samples: 6
Max nTPM: 65.5
Min nTPM: 28.1
P10809_1016
65.5
P10809_1031
40.3
P10809_1050
37.5
P10809_1069
41.8
P10809_1087
28.1
P10809_1110
49.0
T-reg nTPM: 57.1
Samples: 6
Max nTPM: 77.7
Min nTPM: 35.0
P10809_1018
75.8
P10809_1037
35.0
P10809_1056
69.1
P10809_1075
43.8
P10809_1094
77.7
P10809_1106
40.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
110.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.2
Samples: 4
Max nTPM: 123.8
Min nTPM: 52.2
RHH5202_R3573
70.9
RHH5230_R3602
123.8
RHH5259_R3631
52.2
RHH5288_R3660
93.8
Effector memory CD8 T-cell nTPM: 79.2
Samples: 4
Max nTPM: 117.3
Min nTPM: 43.6
RHH5203_R3574
117.3
RHH5231_R3603
76.1
RHH5260_R3632
79.9
RHH5289_R3661
43.6
MAIT T-cell nTPM: 65.7
Samples: 4
Max nTPM: 74.5
Min nTPM: 54.5
RHH5233_R3605
68.7
RHH5205_R3576
74.5
RHH5262_R3634
64.9
RHH5297_R3663
54.5
Memory CD4 T-cell TFH nTPM: 90.4
Samples: 4
Max nTPM: 124.6
Min nTPM: 53.1
RHH5300_R3666
96.8
RHH5236_R3608
87.1
RHH5265_R3637
124.6
RHH5208_R3579
53.1
Memory CD4 T-cell Th1 nTPM: 97.6
Samples: 4
Max nTPM: 108.1
Min nTPM: 86.1
RHH5210_R3581
102.1
RHH5302_R3668
94.1
RHH5238_R3610
86.1
RHH5267_R3639
108.1
Memory CD4 T-cell Th1/Th17 nTPM: 70.6
Samples: 4
Max nTPM: 110.0
Min nTPM: 44.6
RHH5303_R3669
44.6
RHH5211_R3582
110.0
RHH5239_R3611
61.8
RHH5268_R3640
66.0
Memory CD4 T-cell Th17 nTPM: 88.8
Samples: 4
Max nTPM: 112.0
Min nTPM: 77.2
RHH5304_R3670
83.8
RHH5212_R3583
112.0
RHH5240_R3612
82.0
RHH5269_R3641
77.2
Memory CD4 T-cell Th2 nTPM: 110.7
Samples: 4
Max nTPM: 121.7
Min nTPM: 98.0
RHH5305_R3671
98.0
RHH5213_R3584
115.4
RHH5241_R3613
121.7
RHH5270_R3642
107.6
Naive CD4 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 117.9
Min nTPM: 95.7
RHH5306_R3672
112.0
RHH5214_R3585
95.7
RHH5242_R3614
117.9
RHH5271_R3643
105.5
Naive CD8 T-cell nTPM: 79.1
Samples: 4
Max nTPM: 107.5
Min nTPM: 24.8
RHH5201_R3572
24.8
RHH5229_R3601
77.5
RHH5258_R3630
107.5
RHH5287_R3659
106.4
Non-Vd2 gdTCR nTPM: 46.4
Samples: 4
Max nTPM: 56.6
Min nTPM: 38.1
RHH5235_R3607
40.1
RHH5264_R3636
56.6
RHH5207_R3578
50.7
RHH5299_R3665
38.1
T-reg nTPM: 87.0
Samples: 4
Max nTPM: 98.9
Min nTPM: 82.2
RHH5301_R3667
83.3
RHH5237_R3609
82.2
RHH5266_R3638
98.9
RHH5209_R3580
83.7
Terminal effector memory CD4 T-cell nTPM: 60.2
Samples: 2
Max nTPM: 73.2
Min nTPM: 47.1
RHH5243_R3615
47.1
RHH5272_R3644
73.2
Terminal effector memory CD8 T-cell nTPM: 50.5
Samples: 4
Max nTPM: 64.2
Min nTPM: 42.3
RHH5232_R3604
64.2
RHH5204_R3575
42.3
RHH5261_R3633
51.0
RHH5296_R3662
44.6
Vd2 gdTCR nTPM: 66.7
Samples: 4
Max nTPM: 74.8
Min nTPM: 59.0
RHH5234_R3606
63.2
RHH5206_R3577
69.7
RHH5263_R3635
74.8
RHH5298_R3664
59.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
