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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
28.5
nTPM
Monaco:
66.8
nTPM
Schmiedel:
297.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.5
HPA sample
nTPM
gdT-cell nTPM: 13.4
Samples: 6
Max nTPM: 27.5
Min nTPM: 4.0
P10809_1007
27.5
P10809_1022
10.8
P10809_1041
10.0
P10809_1060
4.0
P10809_1077
10.5
P10809_1098
17.7
MAIT T-cell nTPM: 13.1
Samples: 6
Max nTPM: 19.1
Min nTPM: 6.2
P10809_1006
19.0
P10809_1024
9.2
P10809_1043
12.4
P10809_1062
6.2
P10809_1083
12.4
P10809_1097
19.1
Memory CD4 T-cell nTPM: 26.9
Samples: 6
Max nTPM: 41.6
Min nTPM: 5.0
P10809_1014
41.6
P10809_1026
36.1
P10809_1045
40.4
P10809_1064
30.2
P10809_1086
8.2
P10809_1113
5.0
Memory CD8 T-cell nTPM: 28.5
Samples: 5
Max nTPM: 46.5
Min nTPM: 19.0
P10809_1012
26.9
P10809_1027
19.0
P10809_1046
46.5
P10809_1065
22.7
P10809_1111
27.2
Naive CD4 T-cell nTPM: 25.5
Samples: 6
Max nTPM: 70.8
Min nTPM: 4.1
P10809_1015
21.8
P10809_1030
24.2
P10809_1049
70.8
P10809_1068
21.5
P10809_1085
4.1
P10809_1112
10.7
Naive CD8 T-cell nTPM: 14.9
Samples: 6
Max nTPM: 19.9
Min nTPM: 4.7
P10809_1016
16.4
P10809_1031
17.5
P10809_1050
13.7
P10809_1069
19.9
P10809_1087
4.7
P10809_1110
17.2
T-reg nTPM: 21.8
Samples: 6
Max nTPM: 74.4
Min nTPM: 2.8
P10809_1018
15.7
P10809_1037
10.4
P10809_1056
74.4
P10809_1075
15.4
P10809_1094
2.8
P10809_1106
12.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 108.4
Min nTPM: 24.1
RHH5202_R3573
38.6
RHH5230_R3602
108.4
RHH5259_R3631
58.6
RHH5288_R3660
24.1
Effector memory CD8 T-cell nTPM: 66.8
Samples: 4
Max nTPM: 129.0
Min nTPM: 28.7
RHH5203_R3574
28.7
RHH5231_R3603
79.2
RHH5260_R3632
129.0
RHH5289_R3661
30.2
MAIT T-cell nTPM: 42.2
Samples: 4
Max nTPM: 102.5
Min nTPM: 13.3
RHH5233_R3605
16.7
RHH5205_R3576
36.3
RHH5262_R3634
102.5
RHH5297_R3663
13.3
Memory CD4 T-cell TFH nTPM: 42.9
Samples: 4
Max nTPM: 83.4
Min nTPM: 12.4
RHH5300_R3666
34.1
RHH5236_R3608
83.4
RHH5265_R3637
41.5
RHH5208_R3579
12.4
Memory CD4 T-cell Th1 nTPM: 58.1
Samples: 4
Max nTPM: 104.1
Min nTPM: 23.7
RHH5210_R3581
23.7
RHH5302_R3668
46.2
RHH5238_R3610
58.4
RHH5267_R3639
104.1
Memory CD4 T-cell Th1/Th17 nTPM: 52.3
Samples: 4
Max nTPM: 114.0
Min nTPM: 15.7
RHH5303_R3669
15.7
RHH5211_R3582
43.9
RHH5239_R3611
35.6
RHH5268_R3640
114.0
Memory CD4 T-cell Th17 nTPM: 54.6
Samples: 4
Max nTPM: 109.6
Min nTPM: 20.5
RHH5304_R3670
26.6
RHH5212_R3583
61.8
RHH5240_R3612
20.5
RHH5269_R3641
109.6
Memory CD4 T-cell Th2 nTPM: 51.8
Samples: 4
Max nTPM: 109.2
Min nTPM: 25.5
RHH5305_R3671
25.5
RHH5213_R3584
42.8
RHH5241_R3613
29.8
RHH5270_R3642
109.2
Naive CD4 T-cell nTPM: 55.3
Samples: 4
Max nTPM: 74.6
Min nTPM: 33.5
RHH5306_R3672
54.3
RHH5214_R3585
74.6
RHH5242_R3614
33.5
RHH5271_R3643
58.7
Naive CD8 T-cell nTPM: 38.0
Samples: 4
Max nTPM: 52.7
Min nTPM: 8.6
RHH5201_R3572
8.6
RHH5229_R3601
48.9
RHH5258_R3630
52.7
RHH5287_R3659
41.6
Non-Vd2 gdTCR nTPM: 50.8
Samples: 4
Max nTPM: 77.9
Min nTPM: 32.3
RHH5235_R3607
77.9
RHH5264_R3636
41.7
RHH5207_R3578
32.3
RHH5299_R3665
51.1
T-reg nTPM: 54.5
Samples: 4
Max nTPM: 69.1
Min nTPM: 38.4
RHH5301_R3667
38.4
RHH5237_R3609
69.1
RHH5266_R3638
62.3
RHH5209_R3580
48.1
Terminal effector memory CD4 T-cell nTPM: 55.3
Samples: 2
Max nTPM: 69.0
Min nTPM: 41.6
RHH5243_R3615
69.0
RHH5272_R3644
41.6
Terminal effector memory CD8 T-cell nTPM: 48.5
Samples: 4
Max nTPM: 97.5
Min nTPM: 21.9
RHH5232_R3604
38.8
RHH5204_R3575
35.8
RHH5261_R3633
97.5
RHH5296_R3662
21.9
Vd2 gdTCR nTPM: 40.8
Samples: 4
Max nTPM: 45.6
Min nTPM: 36.6
RHH5234_R3606
36.6
RHH5206_R3577
38.5
RHH5263_R3635
45.6
RHH5298_R3664
42.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
