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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.0
nTPM
Monaco:
78.1
nTPM
Schmiedel:
148.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.0
HPA sample
nTPM
gdT-cell nTPM: 50.9
Samples: 6
Max nTPM: 61.1
Min nTPM: 35.0
P10809_1007
35.0
P10809_1022
55.3
P10809_1041
47.8
P10809_1060
50.4
P10809_1077
55.7
P10809_1098
61.1
MAIT T-cell nTPM: 63.9
Samples: 6
Max nTPM: 92.7
Min nTPM: 48.2
P10809_1006
51.2
P10809_1024
75.2
P10809_1043
61.0
P10809_1062
55.3
P10809_1083
48.2
P10809_1097
92.7
Memory CD4 T-cell nTPM: 65.0
Samples: 6
Max nTPM: 80.9
Min nTPM: 52.9
P10809_1014
52.9
P10809_1026
80.9
P10809_1045
61.8
P10809_1064
71.3
P10809_1086
58.9
P10809_1113
64.2
Memory CD8 T-cell nTPM: 68.4
Samples: 5
Max nTPM: 91.3
Min nTPM: 52.0
P10809_1012
59.7
P10809_1027
91.3
P10809_1046
73.2
P10809_1065
52.0
P10809_1111
65.9
Naive CD4 T-cell nTPM: 59.2
Samples: 6
Max nTPM: 77.4
Min nTPM: 47.7
P10809_1015
50.7
P10809_1030
47.7
P10809_1049
77.4
P10809_1068
62.7
P10809_1085
60.7
P10809_1112
56.1
Naive CD8 T-cell nTPM: 57.0
Samples: 6
Max nTPM: 65.8
Min nTPM: 51.5
P10809_1016
51.8
P10809_1031
53.7
P10809_1050
65.8
P10809_1069
63.0
P10809_1087
51.5
P10809_1110
56.4
T-reg nTPM: 80.0
Samples: 6
Max nTPM: 96.0
Min nTPM: 70.6
P10809_1018
74.7
P10809_1037
78.0
P10809_1056
70.6
P10809_1075
80.6
P10809_1094
96.0
P10809_1106
80.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.0
Samples: 4
Max nTPM: 91.6
Min nTPM: 18.9
RHH5202_R3573
68.4
RHH5230_R3602
18.9
RHH5259_R3631
37.0
RHH5288_R3660
91.6
Effector memory CD8 T-cell nTPM: 55.2
Samples: 4
Max nTPM: 71.1
Min nTPM: 41.4
RHH5203_R3574
71.1
RHH5231_R3603
58.4
RHH5260_R3632
41.4
RHH5289_R3661
49.8
MAIT T-cell nTPM: 46.9
Samples: 4
Max nTPM: 53.0
Min nTPM: 36.2
RHH5233_R3605
46.2
RHH5205_R3576
36.2
RHH5262_R3634
53.0
RHH5297_R3663
52.2
Memory CD4 T-cell TFH nTPM: 78.1
Samples: 4
Max nTPM: 89.9
Min nTPM: 58.3
RHH5300_R3666
80.5
RHH5236_R3608
83.6
RHH5265_R3637
89.9
RHH5208_R3579
58.3
Memory CD4 T-cell Th1 nTPM: 44.2
Samples: 4
Max nTPM: 74.9
Min nTPM: 32.0
RHH5210_R3581
36.2
RHH5302_R3668
74.9
RHH5238_R3610
33.6
RHH5267_R3639
32.0
Memory CD4 T-cell Th1/Th17 nTPM: 65.5
Samples: 4
Max nTPM: 105.6
Min nTPM: 30.1
RHH5303_R3669
105.6
RHH5211_R3582
78.6
RHH5239_R3611
30.1
RHH5268_R3640
47.8
Memory CD4 T-cell Th17 nTPM: 45.8
Samples: 4
Max nTPM: 63.2
Min nTPM: 35.0
RHH5304_R3670
38.2
RHH5212_R3583
63.2
RHH5240_R3612
35.0
RHH5269_R3641
46.7
Memory CD4 T-cell Th2 nTPM: 55.5
Samples: 4
Max nTPM: 61.7
Min nTPM: 52.1
RHH5305_R3671
61.7
RHH5213_R3584
52.8
RHH5241_R3613
55.3
RHH5270_R3642
52.1
Naive CD4 T-cell nTPM: 46.3
Samples: 4
Max nTPM: 65.7
Min nTPM: 28.7
RHH5306_R3672
54.7
RHH5214_R3585
65.7
RHH5242_R3614
28.7
RHH5271_R3643
36.1
Naive CD8 T-cell nTPM: 49.1
Samples: 4
Max nTPM: 77.2
Min nTPM: 15.4
RHH5201_R3572
66.5
RHH5229_R3601
15.4
RHH5258_R3630
77.2
RHH5287_R3659
37.2
Non-Vd2 gdTCR nTPM: 51.3
Samples: 4
Max nTPM: 71.2
Min nTPM: 28.3
RHH5235_R3607
28.3
RHH5264_R3636
71.2
RHH5207_R3578
41.0
RHH5299_R3665
64.7
T-reg nTPM: 65.5
Samples: 4
Max nTPM: 84.2
Min nTPM: 47.6
RHH5301_R3667
84.2
RHH5237_R3609
78.2
RHH5266_R3638
47.6
RHH5209_R3580
51.9
Terminal effector memory CD4 T-cell nTPM: 59.8
Samples: 2
Max nTPM: 79.4
Min nTPM: 40.2
RHH5243_R3615
40.2
RHH5272_R3644
79.4
Terminal effector memory CD8 T-cell nTPM: 63.1
Samples: 4
Max nTPM: 76.0
Min nTPM: 52.0
RHH5232_R3604
52.0
RHH5204_R3575
71.6
RHH5261_R3633
52.9
RHH5296_R3662
76.0
Vd2 gdTCR nTPM: 52.5
Samples: 4
Max nTPM: 71.3
Min nTPM: 34.4
RHH5234_R3606
40.8
RHH5206_R3577
63.3
RHH5263_R3635
34.4
RHH5298_R3664
71.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
