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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
29.4
nTPM
Monaco:
282.3
nTPM
Schmiedel:
337.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.4
HPA sample
nTPM
gdT-cell nTPM: 22.1
Samples: 6
Max nTPM: 28.4
Min nTPM: 13.8
P10809_1007
28.4
P10809_1022
19.5
P10809_1041
24.6
P10809_1060
13.8
P10809_1077
21.0
P10809_1098
25.4
MAIT T-cell nTPM: 29.4
Samples: 6
Max nTPM: 42.1
Min nTPM: 23.7
P10809_1006
42.1
P10809_1024
30.1
P10809_1043
23.7
P10809_1062
26.9
P10809_1083
28.3
P10809_1097
25.2
Memory CD4 T-cell nTPM: 24.6
Samples: 6
Max nTPM: 30.5
Min nTPM: 18.8
P10809_1014
27.7
P10809_1026
30.5
P10809_1045
26.3
P10809_1064
19.1
P10809_1086
18.8
P10809_1113
25.4
Memory CD8 T-cell nTPM: 20.0
Samples: 5
Max nTPM: 24.2
Min nTPM: 12.4
P10809_1012
23.2
P10809_1027
24.2
P10809_1046
19.6
P10809_1065
12.4
P10809_1111
20.8
Naive CD4 T-cell nTPM: 23.2
Samples: 6
Max nTPM: 28.6
Min nTPM: 19.7
P10809_1015
23.1
P10809_1030
21.3
P10809_1049
28.6
P10809_1068
24.1
P10809_1085
22.1
P10809_1112
19.7
Naive CD8 T-cell nTPM: 20.9
Samples: 6
Max nTPM: 25.9
Min nTPM: 15.3
P10809_1016
24.0
P10809_1031
25.6
P10809_1050
25.9
P10809_1069
16.4
P10809_1087
15.3
P10809_1110
17.9
T-reg nTPM: 19.3
Samples: 6
Max nTPM: 27.3
Min nTPM: 5.3
P10809_1018
20.9
P10809_1037
16.2
P10809_1056
27.3
P10809_1075
26.6
P10809_1094
5.3
P10809_1106
19.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
282.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 190.9
Samples: 4
Max nTPM: 228.4
Min nTPM: 130.7
RHH5202_R3573
130.7
RHH5230_R3602
226.5
RHH5259_R3631
228.4
RHH5288_R3660
178.0
Effector memory CD8 T-cell nTPM: 171.3
Samples: 4
Max nTPM: 227.8
Min nTPM: 124.3
RHH5203_R3574
124.3
RHH5231_R3603
227.8
RHH5260_R3632
184.7
RHH5289_R3661
148.4
MAIT T-cell nTPM: 210.6
Samples: 4
Max nTPM: 256.3
Min nTPM: 169.5
RHH5233_R3605
169.5
RHH5205_R3576
256.3
RHH5262_R3634
198.9
RHH5297_R3663
217.7
Memory CD4 T-cell TFH nTPM: 164.3
Samples: 4
Max nTPM: 185.7
Min nTPM: 146.4
RHH5300_R3666
169.5
RHH5236_R3608
185.7
RHH5265_R3637
155.5
RHH5208_R3579
146.4
Memory CD4 T-cell Th1 nTPM: 206.7
Samples: 4
Max nTPM: 301.7
Min nTPM: 163.3
RHH5210_R3581
186.4
RHH5302_R3668
163.3
RHH5238_R3610
301.7
RHH5267_R3639
175.2
Memory CD4 T-cell Th1/Th17 nTPM: 208.3
Samples: 4
Max nTPM: 318.0
Min nTPM: 146.0
RHH5303_R3669
146.0
RHH5211_R3582
208.4
RHH5239_R3611
318.0
RHH5268_R3640
160.6
Memory CD4 T-cell Th17 nTPM: 233.9
Samples: 4
Max nTPM: 314.9
Min nTPM: 188.2
RHH5304_R3670
211.6
RHH5212_R3583
221.0
RHH5240_R3612
314.9
RHH5269_R3641
188.2
Memory CD4 T-cell Th2 nTPM: 282.3
Samples: 4
Max nTPM: 320.4
Min nTPM: 246.2
RHH5305_R3671
276.1
RHH5213_R3584
320.4
RHH5241_R3613
286.6
RHH5270_R3642
246.2
Naive CD4 T-cell nTPM: 210.8
Samples: 4
Max nTPM: 233.4
Min nTPM: 190.0
RHH5306_R3672
233.4
RHH5214_R3585
190.0
RHH5242_R3614
224.8
RHH5271_R3643
195.1
Naive CD8 T-cell nTPM: 203.7
Samples: 4
Max nTPM: 281.0
Min nTPM: 160.9
RHH5201_R3572
160.9
RHH5229_R3601
281.0
RHH5258_R3630
161.7
RHH5287_R3659
211.3
Non-Vd2 gdTCR nTPM: 147.3
Samples: 4
Max nTPM: 193.6
Min nTPM: 107.7
RHH5235_R3607
193.6
RHH5264_R3636
151.1
RHH5207_R3578
107.7
RHH5299_R3665
136.8
T-reg nTPM: 200.8
Samples: 4
Max nTPM: 239.5
Min nTPM: 182.7
RHH5301_R3667
182.7
RHH5237_R3609
239.5
RHH5266_R3638
184.5
RHH5209_R3580
196.3
Terminal effector memory CD4 T-cell nTPM: 182.0
Samples: 2
Max nTPM: 279.4
Min nTPM: 84.5
RHH5243_R3615
279.4
RHH5272_R3644
84.5
Terminal effector memory CD8 T-cell nTPM: 160.0
Samples: 4
Max nTPM: 208.8
Min nTPM: 121.0
RHH5232_R3604
208.8
RHH5204_R3575
121.0
RHH5261_R3633
186.4
RHH5296_R3662
123.9
Vd2 gdTCR nTPM: 175.9
Samples: 4
Max nTPM: 212.2
Min nTPM: 129.3
RHH5234_R3606
161.5
RHH5206_R3577
212.2
RHH5263_R3635
200.5
RHH5298_R3664
129.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
