HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:10.2 nTPM
HPA Brain:42.6 nTPM
GTEx:10.2 nTPM
FANTOM5:74.2 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:24.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027347Antibody HPA027755Antibody CAB022094
Glial cells Not detectedLowMedium
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.6
Sample id Sample description nTPM
Hippocampus
nTPM: 37.4
1855 Male, age 76, left hemisphere 40.5
1911 Female, age 85, right hemisphere 38.8
2621 Female, age 67, right hemisphere 38.6
2148 Female, age 91, left hemisphere 38.4
2529 Female, age 94, left hemisphere 36.1
1898 Male, age 80, left hemisphere 32.1
Dentate gyrus
nTPM: 37.3
2531 Female, age 67, both hemispheres 42.6
1927 Female, age 91, both hemispheres 40.7
2246 Female, age 85, both hemispheres 39.4
2010 Male, age 76, both hemispheres 35.3
2530 Female, age 94, left hemisphere 33.1
2528 Male, age 74, both hemispheres 32.8
Entorhinal gyrus
nTPM: 36.5
1787 Male, age 76, left hemisphere 42.5
2764 Male, age 80, right hemisphere 38.4
2613 Female, age 94, left hemisphere 37.6
2686 Male, age 75, right hemisphere 37.2
1938 Female, age 85, left hemisphere 33.4
2117 Female, age 91, right hemisphere 30.0
Hippocampus, CA1
nTPM: 38.5
2749 Male, age 80, left hemisphere 43.1
2045 Male, age 76, both hemispheres 40.3
1873 Female, age 85, both hemispheres 37.9
2082 Female, age 91, right hemisphere 35.9
2527 Male, age 74, both hemispheres 35.2
Hippocampus, CA2
nTPM: 36.8
1892 Male, age 76, both hemispheres 42.1
1963 Male, age 80, left hemisphere 37.8
1940 Female, age 85, left hemisphere 36.9
2437 Female, age 94, left hemisphere 36.4
2113 Female, age 91, right hemisphere 34.2
2249 Male, age 74, both hemispheres 33.2
Hippocampus, CA3
nTPM: 40.1
2137 Male, age 80, left hemisphere 49.1
2620 Female, age 94, left hemisphere 48.4
2861 Female, age 67, both hemispheres 40.0
1891 Female, age 85, both hemispheres 35.9
1867 Male, age 76, both hemispheres 34.1
2436 Male, age 74, both hemispheres 33.0
Parahippocampal cortex
nTPM: 39.1
1850 Male, age 80, both hemispheres 43.4
2245 Female, age 91, both hemispheres 41.0
2622 Female, age 67, right hemisphere 40.8
1990 Female, age 91, right hemisphere 39.9
2693 Female, age 94, both hemispheres 39.9
2018 Male, age 76, both hemispheres 38.7
2532 Female, age 72, left hemisphere 38.3
2250 Female, age 67, right hemisphere 38.0
1933 Female, age 85, both hemispheres 35.6
2692 Male, age 74, both hemispheres 35.2
Perirhinal gyrus
nTPM: 42.6
1847 Female, age 91, left hemisphere 48.2
1794 Male, age 80, right hemisphere 43.3
2848 Male, age 76, right hemisphere 43.3
1841 Female, age 85, right hemisphere 40.3
2521 Female, age 94, right hemisphere 37.7
Subiculum
nTPM: 36.0
1901 Male, age 80, both hemispheres 41.1
2438 Female, age 94, left hemisphere 37.9
2619 Male, age 74, both hemispheres 36.4
1977 Female, age 85, both hemispheres 36.1
2729 Female, age 91, right hemisphere 32.9
2042 Male, age 76, both hemispheres 31.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 197

Max nTPM: 21.9
Min nTPM: 3.6
Std nTPM: 3.2
Median nTPM: 9.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 21.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 20.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 19.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 19.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 19.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 18.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 17.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 16.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 16.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 16.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 16.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.2
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 67.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Subiculum
nTPM: 20.1
Samples: 4

Max nTPM: 21.2
Min nTPM: 19.4
Sample A Female 21.2
Sample B Female 20.3
Sample C Male 19.6
Sample D Male 19.4
Dorsal hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 21.0
Min nTPM: 20.3
Sample A Female 20.4
Sample B Female 20.9
Sample C Male 20.3
Sample D Male 21.0
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 20.5
Min nTPM: 17.9
Sample A Female 18.6
Sample B Female 20.5
Sample C Male 18.2
Sample D Male 17.9
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 22.8
Min nTPM: 18.7
Sample A Female 19.4
Sample B Female 18.7
Sample C Male 19.1
Sample D Male 22.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 24.4
Min nTPM: 22.4
Sample A Male 24.4
Sample B Male 23.0
Sample C Female 22.4
Sample D Female 24.4
Hippocampal formation
nTPM: 24.7
Samples: 4

Max nTPM: 25.7
Min nTPM: 23.6
Sample A Male 25.7
Sample B Male 24.5
Sample C Female 24.9
Sample D Female 23.6

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