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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
70.4
nTPM
Monaco:
80.6
nTPM
Schmiedel:
124.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.4
HPA sample
nTPM
gdT-cell nTPM: 46.0
Samples: 6
Max nTPM: 56.1
Min nTPM: 37.6
P10809_1007
37.6
P10809_1022
45.4
P10809_1041
56.1
P10809_1060
47.9
P10809_1077
40.8
P10809_1098
48.1
MAIT T-cell nTPM: 53.4
Samples: 6
Max nTPM: 65.0
Min nTPM: 43.1
P10809_1006
43.1
P10809_1024
65.0
P10809_1043
59.6
P10809_1062
54.3
P10809_1083
43.8
P10809_1097
54.3
Memory CD4 T-cell nTPM: 52.2
Samples: 6
Max nTPM: 57.8
Min nTPM: 40.7
P10809_1014
53.6
P10809_1026
40.7
P10809_1045
52.3
P10809_1064
52.1
P10809_1086
56.8
P10809_1113
57.8
Memory CD8 T-cell nTPM: 50.5
Samples: 5
Max nTPM: 54.8
Min nTPM: 40.0
P10809_1012
52.2
P10809_1027
40.0
P10809_1046
52.2
P10809_1065
53.5
P10809_1111
54.8
Naive CD4 T-cell nTPM: 63.1
Samples: 6
Max nTPM: 74.7
Min nTPM: 56.3
P10809_1015
64.7
P10809_1030
61.0
P10809_1049
58.4
P10809_1068
74.7
P10809_1085
56.3
P10809_1112
63.4
Naive CD8 T-cell nTPM: 54.0
Samples: 6
Max nTPM: 61.0
Min nTPM: 48.0
P10809_1016
61.0
P10809_1031
48.0
P10809_1050
56.9
P10809_1069
51.7
P10809_1087
48.6
P10809_1110
57.9
T-reg nTPM: 70.4
Samples: 6
Max nTPM: 93.8
Min nTPM: 29.8
P10809_1018
64.0
P10809_1037
82.0
P10809_1056
29.8
P10809_1075
65.7
P10809_1094
93.8
P10809_1106
87.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.6
Samples: 4
Max nTPM: 96.8
Min nTPM: 38.1
RHH5202_R3573
96.8
RHH5230_R3602
42.0
RHH5259_R3631
38.1
RHH5288_R3660
61.6
Effector memory CD8 T-cell nTPM: 64.5
Samples: 4
Max nTPM: 86.6
Min nTPM: 40.8
RHH5203_R3574
86.6
RHH5231_R3603
59.3
RHH5260_R3632
40.8
RHH5289_R3661
71.2
MAIT T-cell nTPM: 67.4
Samples: 4
Max nTPM: 79.9
Min nTPM: 61.9
RHH5233_R3605
65.2
RHH5205_R3576
61.9
RHH5262_R3634
79.9
RHH5297_R3663
62.6
Memory CD4 T-cell TFH nTPM: 80.7
Samples: 4
Max nTPM: 96.3
Min nTPM: 68.5
RHH5300_R3666
68.5
RHH5236_R3608
77.8
RHH5265_R3637
96.3
RHH5208_R3579
80.0
Memory CD4 T-cell Th1 nTPM: 64.8
Samples: 4
Max nTPM: 86.8
Min nTPM: 30.3
RHH5210_R3581
86.8
RHH5302_R3668
77.8
RHH5238_R3610
30.3
RHH5267_R3639
64.2
Memory CD4 T-cell Th1/Th17 nTPM: 63.6
Samples: 4
Max nTPM: 92.5
Min nTPM: 30.1
RHH5303_R3669
72.0
RHH5211_R3582
92.5
RHH5239_R3611
30.1
RHH5268_R3640
59.6
Memory CD4 T-cell Th17 nTPM: 59.4
Samples: 4
Max nTPM: 83.7
Min nTPM: 47.3
RHH5304_R3670
57.5
RHH5212_R3583
83.7
RHH5240_R3612
47.3
RHH5269_R3641
48.9
Memory CD4 T-cell Th2 nTPM: 77.2
Samples: 4
Max nTPM: 107.4
Min nTPM: 59.2
RHH5305_R3671
80.4
RHH5213_R3584
107.4
RHH5241_R3613
61.9
RHH5270_R3642
59.2
Naive CD4 T-cell nTPM: 74.5
Samples: 4
Max nTPM: 87.2
Min nTPM: 61.9
RHH5306_R3672
81.0
RHH5214_R3585
87.2
RHH5242_R3614
61.9
RHH5271_R3643
68.0
Naive CD8 T-cell nTPM: 56.5
Samples: 4
Max nTPM: 84.0
Min nTPM: 20.1
RHH5201_R3572
84.0
RHH5229_R3601
20.1
RHH5258_R3630
71.4
RHH5287_R3659
50.4
Non-Vd2 gdTCR nTPM: 64.3
Samples: 4
Max nTPM: 81.8
Min nTPM: 42.7
RHH5235_R3607
42.7
RHH5264_R3636
63.6
RHH5207_R3578
81.8
RHH5299_R3665
69.1
T-reg nTPM: 72.6
Samples: 4
Max nTPM: 79.1
Min nTPM: 62.1
RHH5301_R3667
76.5
RHH5237_R3609
72.7
RHH5266_R3638
79.1
RHH5209_R3580
62.1
Terminal effector memory CD4 T-cell nTPM: 47.4
Samples: 2
Max nTPM: 69.4
Min nTPM: 25.3
RHH5243_R3615
25.3
RHH5272_R3644
69.4
Terminal effector memory CD8 T-cell nTPM: 60.1
Samples: 4
Max nTPM: 81.5
Min nTPM: 41.2
RHH5232_R3604
55.5
RHH5204_R3575
81.5
RHH5261_R3633
41.2
RHH5296_R3662
62.2
Vd2 gdTCR nTPM: 59.8
Samples: 4
Max nTPM: 74.2
Min nTPM: 41.6
RHH5234_R3606
61.5
RHH5206_R3577
74.2
RHH5263_R3635
41.6
RHH5298_R3664
61.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
