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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4.8
nTPM
Monaco:
210.5
nTPM
Schmiedel:
54.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4.8
HPA sample
nTPM
gdT-cell nTPM: 1.4
Samples: 6
Max nTPM: 3.8
Min nTPM: 0.0
P10809_1007
1.4
P10809_1022
1.0
P10809_1041
0.0
P10809_1060
1.1
P10809_1077
0.8
P10809_1098
3.8
MAIT T-cell nTPM: 4.5
Samples: 6
Max nTPM: 9.8
Min nTPM: 0.7
P10809_1006
4.8
P10809_1024
0.7
P10809_1043
4.8
P10809_1062
2.8
P10809_1083
3.8
P10809_1097
9.8
Memory CD4 T-cell nTPM: 4.8
Samples: 6
Max nTPM: 7.7
Min nTPM: 1.7
P10809_1014
5.5
P10809_1026
6.3
P10809_1045
3.8
P10809_1064
1.7
P10809_1086
4.0
P10809_1113
7.7
Memory CD8 T-cell nTPM: 3.5
Samples: 5
Max nTPM: 5.3
Min nTPM: 0.7
P10809_1012
5.0
P10809_1027
3.4
P10809_1046
3.0
P10809_1065
0.7
P10809_1111
5.3
Naive CD4 T-cell nTPM: 2.5
Samples: 6
Max nTPM: 4.8
Min nTPM: 0.3
P10809_1015
2.5
P10809_1030
0.3
P10809_1049
0.4
P10809_1068
3.1
P10809_1085
3.6
P10809_1112
4.8
Naive CD8 T-cell nTPM: 1.8
Samples: 6
Max nTPM: 3.9
Min nTPM: 0.0
P10809_1016
1.6
P10809_1031
0.0
P10809_1050
3.9
P10809_1069
1.5
P10809_1087
0.9
P10809_1110
3.0
T-reg nTPM: 1.5
Samples: 6
Max nTPM: 5.0
Min nTPM: 0.0
P10809_1018
0.9
P10809_1037
2.8
P10809_1056
0.0
P10809_1075
0.0
P10809_1094
0.0
P10809_1106
5.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
210.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 103.8
Samples: 4
Max nTPM: 288.8
Min nTPM: 10.4
RHH5202_R3573
288.8
RHH5230_R3602
10.4
RHH5259_R3631
53.2
RHH5288_R3660
62.8
Effector memory CD8 T-cell nTPM: 50.0
Samples: 4
Max nTPM: 132.2
Min nTPM: 17.7
RHH5203_R3574
132.2
RHH5231_R3603
17.7
RHH5260_R3632
21.1
RHH5289_R3661
28.9
MAIT T-cell nTPM: 206.8
Samples: 4
Max nTPM: 658.0
Min nTPM: 43.5
RHH5233_R3605
59.5
RHH5205_R3576
658.0
RHH5262_R3634
43.5
RHH5297_R3663
66.0
Memory CD4 T-cell TFH nTPM: 177.7
Samples: 4
Max nTPM: 477.7
Min nTPM: 26.7
RHH5300_R3666
88.6
RHH5236_R3608
26.7
RHH5265_R3637
117.7
RHH5208_R3579
477.7
Memory CD4 T-cell Th1 nTPM: 112.8
Samples: 4
Max nTPM: 256.4
Min nTPM: 32.6
RHH5210_R3581
256.4
RHH5302_R3668
60.0
RHH5238_R3610
32.6
RHH5267_R3639
102.0
Memory CD4 T-cell Th1/Th17 nTPM: 210.5
Samples: 4
Max nTPM: 576.4
Min nTPM: 50.1
RHH5303_R3669
133.4
RHH5211_R3582
576.4
RHH5239_R3611
50.1
RHH5268_R3640
82.0
Memory CD4 T-cell Th17 nTPM: 187.8
Samples: 4
Max nTPM: 439.9
Min nTPM: 53.9
RHH5304_R3670
134.3
RHH5212_R3583
439.9
RHH5240_R3612
53.9
RHH5269_R3641
123.1
Memory CD4 T-cell Th2 nTPM: 196.2
Samples: 4
Max nTPM: 536.4
Min nTPM: 43.7
RHH5305_R3671
94.9
RHH5213_R3584
536.4
RHH5241_R3613
43.7
RHH5270_R3642
109.8
Naive CD4 T-cell nTPM: 85.1
Samples: 4
Max nTPM: 203.1
Min nTPM: 23.0
RHH5306_R3672
42.9
RHH5214_R3585
203.1
RHH5242_R3614
23.0
RHH5271_R3643
71.4
Naive CD8 T-cell nTPM: 76.3
Samples: 4
Max nTPM: 228.9
Min nTPM: 3.1
RHH5201_R3572
228.9
RHH5229_R3601
3.1
RHH5258_R3630
44.1
RHH5287_R3659
29.1
Non-Vd2 gdTCR nTPM: 75.5
Samples: 4
Max nTPM: 263.1
Min nTPM: 0.2
RHH5235_R3607
0.2
RHH5264_R3636
17.0
RHH5207_R3578
263.1
RHH5299_R3665
21.7
T-reg nTPM: 103.2
Samples: 4
Max nTPM: 273.4
Min nTPM: 14.5
RHH5301_R3667
49.5
RHH5237_R3609
14.5
RHH5266_R3638
75.5
RHH5209_R3580
273.4
Terminal effector memory CD4 T-cell nTPM: 39.4
Samples: 2
Max nTPM: 55.1
Min nTPM: 23.6
RHH5243_R3615
23.6
RHH5272_R3644
55.1
Terminal effector memory CD8 T-cell nTPM: 40.6
Samples: 4
Max nTPM: 105.9
Min nTPM: 8.3
RHH5232_R3604
8.3
RHH5204_R3575
105.9
RHH5261_R3633
20.2
RHH5296_R3662
27.8
Vd2 gdTCR nTPM: 115.0
Samples: 4
Max nTPM: 330.6
Min nTPM: 39.8
RHH5234_R3606
39.8
RHH5206_R3577
330.6
RHH5263_R3635
46.7
RHH5298_R3664
42.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
