We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.2
nTPM
Monaco:
160.0
nTPM
Schmiedel:
138.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.2
HPA sample
nTPM
gdT-cell nTPM: 42.0
Samples: 6
Max nTPM: 45.7
Min nTPM: 37.8
P10809_1007
45.7
P10809_1022
39.0
P10809_1041
45.7
P10809_1060
37.8
P10809_1077
39.4
P10809_1098
44.1
MAIT T-cell nTPM: 46.8
Samples: 6
Max nTPM: 58.3
Min nTPM: 33.1
P10809_1006
58.3
P10809_1024
46.1
P10809_1043
33.1
P10809_1062
50.7
P10809_1083
48.1
P10809_1097
44.2
Memory CD4 T-cell nTPM: 45.6
Samples: 6
Max nTPM: 53.8
Min nTPM: 37.0
P10809_1014
53.8
P10809_1026
37.0
P10809_1045
41.2
P10809_1064
44.0
P10809_1086
51.2
P10809_1113
46.2
Memory CD8 T-cell nTPM: 45.7
Samples: 5
Max nTPM: 54.5
Min nTPM: 35.9
P10809_1012
54.5
P10809_1027
35.9
P10809_1046
38.2
P10809_1065
48.3
P10809_1111
51.8
Naive CD4 T-cell nTPM: 43.3
Samples: 6
Max nTPM: 60.5
Min nTPM: 30.9
P10809_1015
60.5
P10809_1030
30.9
P10809_1049
41.2
P10809_1068
47.6
P10809_1085
40.4
P10809_1112
39.3
Naive CD8 T-cell nTPM: 45.2
Samples: 6
Max nTPM: 53.0
Min nTPM: 35.3
P10809_1016
53.0
P10809_1031
45.4
P10809_1050
35.3
P10809_1069
47.9
P10809_1087
50.8
P10809_1110
38.7
T-reg nTPM: 59.2
Samples: 6
Max nTPM: 66.9
Min nTPM: 48.6
P10809_1018
66.9
P10809_1037
64.8
P10809_1056
53.2
P10809_1075
48.6
P10809_1094
66.2
P10809_1106
55.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
160.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.5
Samples: 4
Max nTPM: 130.3
Min nTPM: 74.1
RHH5202_R3573
126.4
RHH5230_R3602
107.0
RHH5259_R3631
74.1
RHH5288_R3660
130.3
Effector memory CD8 T-cell nTPM: 157.4
Samples: 4
Max nTPM: 175.4
Min nTPM: 125.1
RHH5203_R3574
175.4
RHH5231_R3603
169.9
RHH5260_R3632
125.1
RHH5289_R3661
159.3
MAIT T-cell nTPM: 160.1
Samples: 4
Max nTPM: 166.0
Min nTPM: 153.5
RHH5233_R3605
162.3
RHH5205_R3576
166.0
RHH5262_R3634
158.4
RHH5297_R3663
153.5
Memory CD4 T-cell TFH nTPM: 126.7
Samples: 4
Max nTPM: 140.0
Min nTPM: 119.9
RHH5300_R3666
125.7
RHH5236_R3608
119.9
RHH5265_R3637
121.2
RHH5208_R3579
140.0
Memory CD4 T-cell Th1 nTPM: 108.0
Samples: 4
Max nTPM: 140.5
Min nTPM: 66.9
RHH5210_R3581
115.6
RHH5302_R3668
140.5
RHH5238_R3610
66.9
RHH5267_R3639
109.0
Memory CD4 T-cell Th1/Th17 nTPM: 129.7
Samples: 4
Max nTPM: 175.6
Min nTPM: 72.3
RHH5303_R3669
175.6
RHH5211_R3582
146.9
RHH5239_R3611
72.3
RHH5268_R3640
124.0
Memory CD4 T-cell Th17 nTPM: 117.4
Samples: 4
Max nTPM: 137.0
Min nTPM: 101.4
RHH5304_R3670
137.0
RHH5212_R3583
126.5
RHH5240_R3612
101.4
RHH5269_R3641
104.5
Memory CD4 T-cell Th2 nTPM: 149.9
Samples: 4
Max nTPM: 171.5
Min nTPM: 132.3
RHH5305_R3671
171.5
RHH5213_R3584
151.2
RHH5241_R3613
144.7
RHH5270_R3642
132.3
Naive CD4 T-cell nTPM: 112.4
Samples: 4
Max nTPM: 116.4
Min nTPM: 103.2
RHH5306_R3672
113.8
RHH5214_R3585
116.1
RHH5242_R3614
116.4
RHH5271_R3643
103.2
Naive CD8 T-cell nTPM: 104.7
Samples: 4
Max nTPM: 132.1
Min nTPM: 60.5
RHH5201_R3572
132.1
RHH5229_R3601
60.5
RHH5258_R3630
120.5
RHH5287_R3659
105.8
Non-Vd2 gdTCR nTPM: 153.8
Samples: 4
Max nTPM: 191.8
Min nTPM: 115.0
RHH5235_R3607
115.0
RHH5264_R3636
150.2
RHH5207_R3578
191.8
RHH5299_R3665
158.1
T-reg nTPM: 127.8
Samples: 4
Max nTPM: 136.4
Min nTPM: 109.0
RHH5301_R3667
134.7
RHH5237_R3609
131.0
RHH5266_R3638
109.0
RHH5209_R3580
136.4
Terminal effector memory CD4 T-cell nTPM: 154.6
Samples: 2
Max nTPM: 167.6
Min nTPM: 141.5
RHH5243_R3615
141.5
RHH5272_R3644
167.6
Terminal effector memory CD8 T-cell nTPM: 153.2
Samples: 4
Max nTPM: 158.4
Min nTPM: 142.8
RHH5232_R3604
155.8
RHH5204_R3575
155.9
RHH5261_R3633
142.8
RHH5296_R3662
158.4
Vd2 gdTCR nTPM: 144.4
Samples: 4
Max nTPM: 182.5
Min nTPM: 110.4
RHH5234_R3606
167.5
RHH5206_R3577
182.5
RHH5263_R3635
110.4
RHH5298_R3664
117.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
