HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:30.2 nTPM
HPA Brain:30.5 nTPM
GTEx:30.2 nTPM
FANTOM5:32.6 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:36.4 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013582Antibody HPA014133
Glial cells LowMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.5
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
1855 Male, age 76, left hemisphere 35.0
1898 Male, age 80, left hemisphere 31.2
2621 Female, age 67, right hemisphere 27.8
2148 Female, age 91, left hemisphere 26.8
1911 Female, age 85, right hemisphere 23.7
2529 Female, age 94, left hemisphere 22.3
Dentate gyrus
nTPM: 27.1
2010 Male, age 76, both hemispheres 33.2
1927 Female, age 91, both hemispheres 31.2
2530 Female, age 94, left hemisphere 29.0
2528 Male, age 74, both hemispheres 25.8
2246 Female, age 85, both hemispheres 22.3
2531 Female, age 67, both hemispheres 21.2
Entorhinal gyrus
nTPM: 23.8
2764 Male, age 80, right hemisphere 27.4
1787 Male, age 76, left hemisphere 26.0
2117 Female, age 91, right hemisphere 23.9
1938 Female, age 85, left hemisphere 22.8
2613 Female, age 94, left hemisphere 22.5
2686 Male, age 75, right hemisphere 20.0
Hippocampus, CA1
nTPM: 30.5
2749 Male, age 80, left hemisphere 48.9
2045 Male, age 76, both hemispheres 33.0
1873 Female, age 85, both hemispheres 26.8
2527 Male, age 74, both hemispheres 23.4
2082 Female, age 91, right hemisphere 20.2
Hippocampus, CA2
nTPM: 27.1
1963 Male, age 80, left hemisphere 37.4
1892 Male, age 76, both hemispheres 29.8
2437 Female, age 94, left hemisphere 25.5
2113 Female, age 91, right hemisphere 23.4
1940 Female, age 85, left hemisphere 23.2
2249 Male, age 74, both hemispheres 23.2
Hippocampus, CA3
nTPM: 27.0
2137 Male, age 80, left hemisphere 36.2
1867 Male, age 76, both hemispheres 32.2
2861 Female, age 67, both hemispheres 25.6
2620 Female, age 94, left hemisphere 23.5
2436 Male, age 74, both hemispheres 22.8
1891 Female, age 85, both hemispheres 21.7
Parahippocampal cortex
nTPM: 22.3
1933 Female, age 85, both hemispheres 24.9
1850 Male, age 80, both hemispheres 24.3
2018 Male, age 76, both hemispheres 23.7
2693 Female, age 94, both hemispheres 23.4
2245 Female, age 91, both hemispheres 22.7
2250 Female, age 67, right hemisphere 22.0
2532 Female, age 72, left hemisphere 21.7
1990 Female, age 91, right hemisphere 20.9
2692 Male, age 74, both hemispheres 20.6
2622 Female, age 67, right hemisphere 19.0
Perirhinal gyrus
nTPM: 24.6
1847 Female, age 91, left hemisphere 27.2
1794 Male, age 80, right hemisphere 26.8
2521 Female, age 94, right hemisphere 26.4
1841 Female, age 85, right hemisphere 21.8
2848 Male, age 76, right hemisphere 20.7
Subiculum
nTPM: 24.7
1901 Male, age 80, both hemispheres 28.1
2042 Male, age 76, both hemispheres 27.5
2729 Female, age 91, right hemisphere 24.5
1977 Female, age 85, both hemispheres 23.2
2619 Male, age 74, both hemispheres 22.8
2438 Female, age 94, left hemisphere 21.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.2
Samples: 197

Max nTPM: 56.3
Min nTPM: 15.9
Std nTPM: 6.8
Median nTPM: 29.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 56.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 50.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 47.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 45.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 45.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 44.1
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 42.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 42.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 41.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 41.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.6
FF:10169-103B7 60 years, female 44.6
FF:10153-102I9 76 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Subiculum
nTPM: 14.2
Samples: 4

Max nTPM: 17.2
Min nTPM: 12.3
Sample A Female 17.2
Sample B Female 13.1
Sample C Male 14.2
Sample D Male 12.3
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 15.1
Min nTPM: 10.6
Sample A Female 15.1
Sample B Female 13.4
Sample C Male 13.1
Sample D Male 10.6
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.7
Sample A Female 14.2
Sample B Female 14.6
Sample C Male 13.2
Sample D Male 11.7
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 16.8
Min nTPM: 9.6
Sample A Female 11.2
Sample B Female 9.6
Sample C Male 16.8
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 37.3
Min nTPM: 31.1
Sample A Male 31.1
Sample B Male 34.6
Sample C Female 35.6
Sample D Female 37.3
Hippocampal formation
nTPM: 36.4
Samples: 4

Max nTPM: 37.9
Min nTPM: 33.7
Sample A Male 36.3
Sample B Male 33.7
Sample C Female 37.9
Sample D Female 37.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
73584783 Antisense, RP_051206_01_B07, Mouse strain C57BL/6J (56 days, male) 4.6

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