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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.8
nTPM
Monaco:
125.6
nTPM
Schmiedel:
73.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.8
HPA sample
nTPM
gdT-cell nTPM: 50.6
Samples: 6
Max nTPM: 79.1
Min nTPM: 18.7
P10809_1007
41.4
P10809_1022
59.3
P10809_1041
79.1
P10809_1060
18.7
P10809_1077
52.4
P10809_1098
52.5
MAIT T-cell nTPM: 53.8
Samples: 6
Max nTPM: 75.4
Min nTPM: 29.8
P10809_1006
50.8
P10809_1024
35.8
P10809_1043
75.4
P10809_1062
29.8
P10809_1083
64.4
P10809_1097
66.5
Memory CD4 T-cell nTPM: 42.2
Samples: 6
Max nTPM: 60.9
Min nTPM: 19.3
P10809_1014
34.8
P10809_1026
60.9
P10809_1045
55.0
P10809_1064
46.5
P10809_1086
36.6
P10809_1113
19.3
Memory CD8 T-cell nTPM: 50.2
Samples: 5
Max nTPM: 61.7
Min nTPM: 42.2
P10809_1012
45.9
P10809_1027
47.7
P10809_1046
61.7
P10809_1065
42.2
P10809_1111
53.4
Naive CD4 T-cell nTPM: 40.3
Samples: 6
Max nTPM: 56.2
Min nTPM: 26.7
P10809_1015
26.7
P10809_1030
42.9
P10809_1049
56.2
P10809_1068
50.0
P10809_1085
29.3
P10809_1112
36.6
Naive CD8 T-cell nTPM: 41.8
Samples: 6
Max nTPM: 59.8
Min nTPM: 21.3
P10809_1016
26.0
P10809_1031
58.0
P10809_1050
59.8
P10809_1069
50.1
P10809_1087
21.3
P10809_1110
35.5
T-reg nTPM: 51.1
Samples: 6
Max nTPM: 93.7
Min nTPM: 22.1
P10809_1018
38.1
P10809_1037
58.1
P10809_1056
93.7
P10809_1075
52.8
P10809_1094
22.1
P10809_1106
41.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.9
Samples: 4
Max nTPM: 141.0
Min nTPM: 23.3
RHH5202_R3573
23.3
RHH5230_R3602
141.0
RHH5259_R3631
95.2
RHH5288_R3660
84.1
Effector memory CD8 T-cell nTPM: 101.6
Samples: 4
Max nTPM: 147.1
Min nTPM: 37.0
RHH5203_R3574
77.7
RHH5231_R3603
144.7
RHH5260_R3632
147.1
RHH5289_R3661
37.0
MAIT T-cell nTPM: 115.3
Samples: 4
Max nTPM: 167.1
Min nTPM: 73.5
RHH5233_R3605
73.5
RHH5205_R3576
125.5
RHH5262_R3634
167.1
RHH5297_R3663
95.1
Memory CD4 T-cell TFH nTPM: 64.1
Samples: 4
Max nTPM: 87.9
Min nTPM: 22.5
RHH5300_R3666
66.5
RHH5236_R3608
87.9
RHH5265_R3637
79.3
RHH5208_R3579
22.5
Memory CD4 T-cell Th1 nTPM: 86.5
Samples: 4
Max nTPM: 114.9
Min nTPM: 63.1
RHH5210_R3581
85.3
RHH5302_R3668
63.1
RHH5238_R3610
82.8
RHH5267_R3639
114.9
Memory CD4 T-cell Th1/Th17 nTPM: 87.8
Samples: 4
Max nTPM: 118.4
Min nTPM: 37.6
RHH5303_R3669
37.6
RHH5211_R3582
118.4
RHH5239_R3611
89.7
RHH5268_R3640
105.6
Memory CD4 T-cell Th17 nTPM: 80.9
Samples: 4
Max nTPM: 119.0
Min nTPM: 54.9
RHH5304_R3670
54.9
RHH5212_R3583
119.0
RHH5240_R3612
55.9
RHH5269_R3641
93.6
Memory CD4 T-cell Th2 nTPM: 101.6
Samples: 4
Max nTPM: 148.4
Min nTPM: 44.6
RHH5305_R3671
100.5
RHH5213_R3584
148.4
RHH5241_R3613
44.6
RHH5270_R3642
112.7
Naive CD4 T-cell nTPM: 80.5
Samples: 4
Max nTPM: 100.1
Min nTPM: 54.1
RHH5306_R3672
100.1
RHH5214_R3585
92.4
RHH5242_R3614
54.1
RHH5271_R3643
75.4
Naive CD8 T-cell nTPM: 69.7
Samples: 4
Max nTPM: 100.9
Min nTPM: 24.6
RHH5201_R3572
24.6
RHH5229_R3601
55.5
RHH5258_R3630
97.8
RHH5287_R3659
100.9
Non-Vd2 gdTCR nTPM: 91.6
Samples: 4
Max nTPM: 130.8
Min nTPM: 52.1
RHH5235_R3607
130.8
RHH5264_R3636
78.5
RHH5207_R3578
52.1
RHH5299_R3665
105.1
T-reg nTPM: 105.4
Samples: 4
Max nTPM: 116.1
Min nTPM: 93.7
RHH5301_R3667
93.7
RHH5237_R3609
116.1
RHH5266_R3638
99.5
RHH5209_R3580
112.2
Terminal effector memory CD4 T-cell nTPM: 122.1
Samples: 2
Max nTPM: 155.2
Min nTPM: 89.0
RHH5243_R3615
155.2
RHH5272_R3644
89.0
Terminal effector memory CD8 T-cell nTPM: 93.3
Samples: 4
Max nTPM: 137.8
Min nTPM: 47.1
RHH5232_R3604
86.7
RHH5204_R3575
101.5
RHH5261_R3633
137.8
RHH5296_R3662
47.1
Vd2 gdTCR nTPM: 125.7
Samples: 4
Max nTPM: 160.1
Min nTPM: 85.3
RHH5234_R3606
146.5
RHH5206_R3577
85.3
RHH5263_R3635
160.1
RHH5298_R3664
110.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
