HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:17.8 nTPM
HPA Brain:12.5 nTPM
GTEx:17.8 nTPM
FANTOM5:66.9 Scaled Tags Per Million
Pig:52.0 nTPM
Mouse:97.3 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037569
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
1898 Male, age 80, left hemisphere 15.3
1855 Male, age 76, left hemisphere 12.3
2621 Female, age 67, right hemisphere 10.2
1911 Female, age 85, right hemisphere 8.9
2529 Female, age 94, left hemisphere 8.7
2148 Female, age 91, left hemisphere 8.2
Dentate gyrus
nTPM: 10.4
1927 Female, age 91, both hemispheres 14.5
2528 Male, age 74, both hemispheres 11.8
2010 Male, age 76, both hemispheres 10.5
2246 Female, age 85, both hemispheres 10.4
2530 Female, age 94, left hemisphere 8.7
2531 Female, age 67, both hemispheres 6.7
Entorhinal gyrus
nTPM: 9.7
1938 Female, age 85, left hemisphere 12.1
1787 Male, age 76, left hemisphere 10.1
2117 Female, age 91, right hemisphere 10.1
2686 Male, age 75, right hemisphere 9.2
2764 Male, age 80, right hemisphere 8.5
2613 Female, age 94, left hemisphere 8.0
Hippocampus, CA1
nTPM: 12.5
2749 Male, age 80, left hemisphere 18.8
1873 Female, age 85, both hemispheres 13.7
2527 Male, age 74, both hemispheres 10.2
2045 Male, age 76, both hemispheres 10.0
2082 Female, age 91, right hemisphere 9.8
Hippocampus, CA2
nTPM: 11.3
1963 Male, age 80, left hemisphere 15.3
1892 Male, age 76, both hemispheres 14.1
2249 Male, age 74, both hemispheres 11.8
2113 Female, age 91, right hemisphere 10.5
2437 Female, age 94, left hemisphere 8.3
1940 Female, age 85, left hemisphere 8.1
Hippocampus, CA3
nTPM: 10.9
2137 Male, age 80, left hemisphere 16.3
2436 Male, age 74, both hemispheres 12.5
1867 Male, age 76, both hemispheres 12.3
1891 Female, age 85, both hemispheres 10.4
2620 Female, age 94, left hemisphere 7.1
2861 Female, age 67, both hemispheres 7.0
Parahippocampal cortex
nTPM: 10.7
1850 Male, age 80, both hemispheres 14.3
2250 Female, age 67, right hemisphere 12.4
1990 Female, age 91, right hemisphere 12.3
2692 Male, age 74, both hemispheres 11.5
2245 Female, age 91, both hemispheres 11.3
2693 Female, age 94, both hemispheres 11.2
1933 Female, age 85, both hemispheres 10.6
2532 Female, age 72, left hemisphere 8.9
2018 Male, age 76, both hemispheres 8.8
2622 Female, age 67, right hemisphere 6.2
Perirhinal gyrus
nTPM: 11.9
1847 Female, age 91, left hemisphere 13.6
1841 Female, age 85, right hemisphere 12.2
1794 Male, age 80, right hemisphere 11.9
2521 Female, age 94, right hemisphere 11.7
2848 Male, age 76, right hemisphere 9.9
Subiculum
nTPM: 9.8
1977 Female, age 85, both hemispheres 12.0
1901 Male, age 80, both hemispheres 10.1
2438 Female, age 94, left hemisphere 9.7
2619 Male, age 74, both hemispheres 9.7
2042 Male, age 76, both hemispheres 8.5
2729 Female, age 91, right hemisphere 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 30.9
Min nTPM: 10.2
Std nTPM: 3.8
Median nTPM: 17.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 29.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 27.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 27.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 26.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 25.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 25.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 25.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 25.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 25.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.9
FF:10169-103B7 60 years, female 79.9
FF:10153-102I9 76 years, female 53.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.0
Pig sample Sample description nTPM
Subiculum
nTPM: 49.6
Samples: 4

Max nTPM: 56.3
Min nTPM: 44.7
Sample A Female 56.3
Sample B Female 44.7
Sample C Male 45.3
Sample D Male 52.0
Dorsal hippocampus
nTPM: 52.0
Samples: 4

Max nTPM: 55.2
Min nTPM: 47.8
Sample A Female 55.2
Sample B Female 52.9
Sample C Male 52.2
Sample D Male 47.8
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 62.5
Min nTPM: 44.3
Sample A Female 49.4
Sample B Female 62.5
Sample C Male 48.6
Sample D Male 44.3
Ventral hippocampus
nTPM: 46.1
Samples: 4

Max nTPM: 54.0
Min nTPM: 38.1
Sample A Female 54.0
Sample B Female 42.3
Sample C Male 38.1
Sample D Male 50.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.3
Samples: 4

Max nTPM: 106.3
Min nTPM: 93.3
Sample A Male 93.3
Sample B Male 94.9
Sample C Female 94.6
Sample D Female 106.3
Hippocampal formation
nTPM: 96.3
Samples: 4

Max nTPM: 99.7
Min nTPM: 88.0
Sample A Male 99.3
Sample B Male 99.7
Sample C Female 98.1
Sample D Female 88.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
68193071 Antisense, RP_040916_02_D03, Mouse strain C57BL/6J (56 days, male) 9.8

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