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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
83.8
nTPM
Monaco:
156.6
nTPM
Schmiedel:
35.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.8
HPA sample
nTPM
gdT-cell nTPM: 83.8
Samples: 6
Max nTPM: 98.8
Min nTPM: 52.0
P10809_1007
52.0
P10809_1022
92.8
P10809_1041
98.8
P10809_1060
84.4
P10809_1077
76.6
P10809_1098
98.4
MAIT T-cell nTPM: 69.7
Samples: 6
Max nTPM: 91.6
Min nTPM: 34.7
P10809_1006
34.7
P10809_1024
89.7
P10809_1043
91.6
P10809_1062
77.8
P10809_1083
54.3
P10809_1097
70.1
Memory CD4 T-cell nTPM: 56.7
Samples: 6
Max nTPM: 75.8
Min nTPM: 28.7
P10809_1014
28.7
P10809_1026
45.4
P10809_1045
66.2
P10809_1064
75.8
P10809_1086
70.6
P10809_1113
53.2
Memory CD8 T-cell nTPM: 69.7
Samples: 5
Max nTPM: 87.2
Min nTPM: 35.9
P10809_1012
35.9
P10809_1027
72.5
P10809_1046
87.2
P10809_1065
86.6
P10809_1111
66.4
Naive CD4 T-cell nTPM: 10.9
Samples: 6
Max nTPM: 27.1
Min nTPM: 5.4
P10809_1015
6.3
P10809_1030
5.4
P10809_1049
7.7
P10809_1068
11.3
P10809_1085
27.1
P10809_1112
7.3
Naive CD8 T-cell nTPM: 42.5
Samples: 6
Max nTPM: 76.4
Min nTPM: 7.4
P10809_1016
7.4
P10809_1031
36.8
P10809_1050
43.0
P10809_1069
76.4
P10809_1087
75.2
P10809_1110
15.9
T-reg nTPM: 82.9
Samples: 6
Max nTPM: 110.5
Min nTPM: 46.2
P10809_1018
46.2
P10809_1037
80.0
P10809_1056
110.5
P10809_1075
91.6
P10809_1094
90.2
P10809_1106
78.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.9
Samples: 4
Max nTPM: 80.0
Min nTPM: 41.8
RHH5202_R3573
60.8
RHH5230_R3602
41.8
RHH5259_R3631
56.8
RHH5288_R3660
80.0
Effector memory CD8 T-cell nTPM: 128.8
Samples: 4
Max nTPM: 153.5
Min nTPM: 107.7
RHH5203_R3574
107.7
RHH5231_R3603
129.1
RHH5260_R3632
125.0
RHH5289_R3661
153.5
MAIT T-cell nTPM: 109.3
Samples: 4
Max nTPM: 122.9
Min nTPM: 97.6
RHH5233_R3605
97.6
RHH5205_R3576
122.9
RHH5262_R3634
106.2
RHH5297_R3663
110.3
Memory CD4 T-cell TFH nTPM: 34.5
Samples: 4
Max nTPM: 46.7
Min nTPM: 17.8
RHH5300_R3666
46.7
RHH5236_R3608
17.8
RHH5265_R3637
37.5
RHH5208_R3579
36.0
Memory CD4 T-cell Th1 nTPM: 57.6
Samples: 4
Max nTPM: 70.3
Min nTPM: 41.6
RHH5210_R3581
41.6
RHH5302_R3668
63.4
RHH5238_R3610
55.2
RHH5267_R3639
70.3
Memory CD4 T-cell Th1/Th17 nTPM: 105.6
Samples: 4
Max nTPM: 138.2
Min nTPM: 76.2
RHH5303_R3669
138.2
RHH5211_R3582
105.8
RHH5239_R3611
76.2
RHH5268_R3640
102.3
Memory CD4 T-cell Th17 nTPM: 106.8
Samples: 4
Max nTPM: 115.2
Min nTPM: 101.1
RHH5304_R3670
115.2
RHH5212_R3583
103.4
RHH5240_R3612
107.4
RHH5269_R3641
101.1
Memory CD4 T-cell Th2 nTPM: 74.4
Samples: 4
Max nTPM: 89.6
Min nTPM: 52.2
RHH5305_R3671
71.0
RHH5213_R3584
89.6
RHH5241_R3613
52.2
RHH5270_R3642
84.7
Naive CD4 T-cell nTPM: 11.7
Samples: 4
Max nTPM: 14.2
Min nTPM: 10.1
RHH5306_R3672
10.1
RHH5214_R3585
10.3
RHH5242_R3614
14.2
RHH5271_R3643
12.2
Naive CD8 T-cell nTPM: 7.4
Samples: 4
Max nTPM: 9.4
Min nTPM: 5.2
RHH5201_R3572
9.4
RHH5229_R3601
9.4
RHH5258_R3630
5.2
RHH5287_R3659
5.5
Non-Vd2 gdTCR nTPM: 146.5
Samples: 4
Max nTPM: 164.5
Min nTPM: 132.0
RHH5235_R3607
132.0
RHH5264_R3636
144.3
RHH5207_R3578
145.1
RHH5299_R3665
164.5
T-reg nTPM: 70.7
Samples: 4
Max nTPM: 85.3
Min nTPM: 56.6
RHH5301_R3667
85.3
RHH5237_R3609
58.1
RHH5266_R3638
82.6
RHH5209_R3580
56.6
Terminal effector memory CD4 T-cell nTPM: 156.6
Samples: 2
Max nTPM: 175.0
Min nTPM: 138.2
RHH5243_R3615
175.0
RHH5272_R3644
138.2
Terminal effector memory CD8 T-cell nTPM: 152.7
Samples: 4
Max nTPM: 178.8
Min nTPM: 106.7
RHH5232_R3604
155.0
RHH5204_R3575
106.7
RHH5261_R3633
178.8
RHH5296_R3662
170.2
Vd2 gdTCR nTPM: 109.3
Samples: 4
Max nTPM: 130.7
Min nTPM: 99.7
RHH5234_R3606
105.7
RHH5206_R3577
130.7
RHH5263_R3635
101.1
RHH5298_R3664
99.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
