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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
128.1
nTPM
Monaco:
243.7
nTPM
Schmiedel:
212.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
128.1
HPA sample
nTPM
gdT-cell nTPM: 57.7
Samples: 6
Max nTPM: 72.1
Min nTPM: 41.8
P10809_1007
41.8
P10809_1022
72.1
P10809_1041
57.6
P10809_1060
57.6
P10809_1077
54.2
P10809_1098
62.6
MAIT T-cell nTPM: 79.0
Samples: 6
Max nTPM: 96.1
Min nTPM: 66.4
P10809_1006
66.5
P10809_1024
96.1
P10809_1043
73.1
P10809_1062
66.4
P10809_1083
78.9
P10809_1097
92.8
Memory CD4 T-cell nTPM: 89.1
Samples: 6
Max nTPM: 110.2
Min nTPM: 72.4
P10809_1014
75.9
P10809_1026
110.2
P10809_1045
98.5
P10809_1064
72.4
P10809_1086
86.7
P10809_1113
90.7
Memory CD8 T-cell nTPM: 72.2
Samples: 5
Max nTPM: 93.1
Min nTPM: 63.9
P10809_1012
71.3
P10809_1027
64.2
P10809_1046
68.3
P10809_1065
63.9
P10809_1111
93.1
Naive CD4 T-cell nTPM: 80.2
Samples: 6
Max nTPM: 100.8
Min nTPM: 62.0
P10809_1015
62.0
P10809_1030
85.8
P10809_1049
100.8
P10809_1068
75.5
P10809_1085
80.9
P10809_1112
76.2
Naive CD8 T-cell nTPM: 71.6
Samples: 6
Max nTPM: 86.0
Min nTPM: 60.5
P10809_1016
67.1
P10809_1031
86.0
P10809_1050
76.8
P10809_1069
71.0
P10809_1087
60.5
P10809_1110
68.1
T-reg nTPM: 128.1
Samples: 6
Max nTPM: 160.9
Min nTPM: 101.1
P10809_1018
101.1
P10809_1037
160.9
P10809_1056
127.1
P10809_1075
116.8
P10809_1094
121.8
P10809_1106
141.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
243.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 188.7
Samples: 4
Max nTPM: 221.6
Min nTPM: 151.4
RHH5202_R3573
221.6
RHH5230_R3602
210.0
RHH5259_R3631
151.4
RHH5288_R3660
171.8
Effector memory CD8 T-cell nTPM: 215.1
Samples: 4
Max nTPM: 264.1
Min nTPM: 190.7
RHH5203_R3574
200.8
RHH5231_R3603
204.8
RHH5260_R3632
190.7
RHH5289_R3661
264.1
MAIT T-cell nTPM: 198.4
Samples: 4
Max nTPM: 211.4
Min nTPM: 167.2
RHH5233_R3605
208.3
RHH5205_R3576
211.4
RHH5262_R3634
206.8
RHH5297_R3663
167.2
Memory CD4 T-cell TFH nTPM: 221.3
Samples: 4
Max nTPM: 249.3
Min nTPM: 183.8
RHH5300_R3666
219.0
RHH5236_R3608
249.3
RHH5265_R3637
183.8
RHH5208_R3579
232.9
Memory CD4 T-cell Th1 nTPM: 173.8
Samples: 4
Max nTPM: 184.5
Min nTPM: 147.7
RHH5210_R3581
182.0
RHH5302_R3668
184.5
RHH5238_R3610
147.7
RHH5267_R3639
181.0
Memory CD4 T-cell Th1/Th17 nTPM: 210.1
Samples: 4
Max nTPM: 245.9
Min nTPM: 195.9
RHH5303_R3669
245.9
RHH5211_R3582
199.0
RHH5239_R3611
199.5
RHH5268_R3640
195.9
Memory CD4 T-cell Th17 nTPM: 243.7
Samples: 4
Max nTPM: 312.4
Min nTPM: 186.6
RHH5304_R3670
242.4
RHH5212_R3583
233.2
RHH5240_R3612
312.4
RHH5269_R3641
186.6
Memory CD4 T-cell Th2 nTPM: 213.6
Samples: 4
Max nTPM: 220.1
Min nTPM: 199.7
RHH5305_R3671
216.7
RHH5213_R3584
220.1
RHH5241_R3613
217.8
RHH5270_R3642
199.7
Naive CD4 T-cell nTPM: 166.2
Samples: 4
Max nTPM: 190.9
Min nTPM: 154.7
RHH5306_R3672
156.1
RHH5214_R3585
163.1
RHH5242_R3614
154.7
RHH5271_R3643
190.9
Naive CD8 T-cell nTPM: 159.4
Samples: 4
Max nTPM: 183.2
Min nTPM: 140.4
RHH5201_R3572
183.2
RHH5229_R3601
140.4
RHH5258_R3630
144.7
RHH5287_R3659
169.2
Non-Vd2 gdTCR nTPM: 179.0
Samples: 4
Max nTPM: 192.8
Min nTPM: 166.7
RHH5235_R3607
192.8
RHH5264_R3636
170.5
RHH5207_R3578
185.8
RHH5299_R3665
166.7
T-reg nTPM: 202.6
Samples: 4
Max nTPM: 255.3
Min nTPM: 175.8
RHH5301_R3667
175.8
RHH5237_R3609
255.3
RHH5266_R3638
194.9
RHH5209_R3580
184.5
Terminal effector memory CD4 T-cell nTPM: 203.9
Samples: 2
Max nTPM: 228.9
Min nTPM: 178.9
RHH5243_R3615
228.9
RHH5272_R3644
178.9
Terminal effector memory CD8 T-cell nTPM: 181.9
Samples: 4
Max nTPM: 233.2
Min nTPM: 148.6
RHH5232_R3604
233.2
RHH5204_R3575
148.6
RHH5261_R3633
158.9
RHH5296_R3662
186.8
Vd2 gdTCR nTPM: 185.7
Samples: 4
Max nTPM: 206.0
Min nTPM: 136.5
RHH5234_R3606
206.0
RHH5206_R3577
194.5
RHH5263_R3635
205.8
RHH5298_R3664
136.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
