HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.4 nTPM
HPA Brain:16.3 nTPM
GTEx:19.4 nTPM
FANTOM5:5.7 Scaled Tags Per Million
Pig:15.6 nTPM
Mouse:17.2 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039189Antibody HPA039859
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.8
2529 Female, age 94, left hemisphere 18.0
1898 Male, age 80, left hemisphere 17.8
1911 Female, age 85, right hemisphere 16.4
1855 Male, age 76, left hemisphere 16.0
2621 Female, age 67, right hemisphere 13.6
2148 Female, age 91, left hemisphere 13.1
Dentate gyrus
nTPM: 14.4
2010 Male, age 76, both hemispheres 17.5
2530 Female, age 94, left hemisphere 16.1
2528 Male, age 74, both hemispheres 14.8
1927 Female, age 91, both hemispheres 14.4
2246 Female, age 85, both hemispheres 12.2
2531 Female, age 67, both hemispheres 11.3
Entorhinal gyrus
nTPM: 15.3
2117 Female, age 91, right hemisphere 18.2
2686 Male, age 75, right hemisphere 17.4
1938 Female, age 85, left hemisphere 15.7
2764 Male, age 80, right hemisphere 14.9
1787 Male, age 76, left hemisphere 13.7
2613 Female, age 94, left hemisphere 11.8
Hippocampus, CA1
nTPM: 14.9
2749 Male, age 80, left hemisphere 17.3
1873 Female, age 85, both hemispheres 16.5
2527 Male, age 74, both hemispheres 14.7
2045 Male, age 76, both hemispheres 13.2
2082 Female, age 91, right hemisphere 13.1
Hippocampus, CA2
nTPM: 16.3
1963 Male, age 80, left hemisphere 19.9
2249 Male, age 74, both hemispheres 16.4
1892 Male, age 76, both hemispheres 16.2
2437 Female, age 94, left hemisphere 16.0
2113 Female, age 91, right hemisphere 15.4
1940 Female, age 85, left hemisphere 13.9
Hippocampus, CA3
nTPM: 14.3
1891 Female, age 85, both hemispheres 17.4
1867 Male, age 76, both hemispheres 16.4
2436 Male, age 74, both hemispheres 15.3
2137 Male, age 80, left hemisphere 14.3
2620 Female, age 94, left hemisphere 11.6
2861 Female, age 67, both hemispheres 10.8
Parahippocampal cortex
nTPM: 14.3
1850 Male, age 80, both hemispheres 16.5
2018 Male, age 76, both hemispheres 16.3
2692 Male, age 74, both hemispheres 15.3
1990 Female, age 91, right hemisphere 15.0
2532 Female, age 72, left hemisphere 14.0
1933 Female, age 85, both hemispheres 13.9
2245 Female, age 91, both hemispheres 13.6
2250 Female, age 67, right hemisphere 13.6
2693 Female, age 94, both hemispheres 12.7
2622 Female, age 67, right hemisphere 11.8
Perirhinal gyrus
nTPM: 13.9
1847 Female, age 91, left hemisphere 15.9
1794 Male, age 80, right hemisphere 14.3
2848 Male, age 76, right hemisphere 13.8
1841 Female, age 85, right hemisphere 13.7
2521 Female, age 94, right hemisphere 12.0
Subiculum
nTPM: 16.3
2438 Female, age 94, left hemisphere 17.6
1901 Male, age 80, both hemispheres 17.5
2042 Male, age 76, both hemispheres 17.0
1977 Female, age 85, both hemispheres 15.4
2729 Female, age 91, right hemisphere 15.4
2619 Male, age 74, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 45.6
Min nTPM: 6.8
Std nTPM: 5.8
Median nTPM: 18.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 45.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 42.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 38.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 38.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 35.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 33.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 30.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 29.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 28.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.7
FF:10153-102I9 76 years, female 6.2
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.6
Pig sample Sample description nTPM
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 16.6
Min nTPM: 13.2
Sample A Female 16.6
Sample B Female 13.8
Sample C Male 13.2
Sample D Male 13.5
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 14.6
Min nTPM: 10.8
Sample A Female 14.1
Sample B Female 11.8
Sample C Male 14.6
Sample D Male 10.8
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.9
Min nTPM: 12.7
Sample A Female 15.1
Sample B Female 17.9
Sample C Male 16.5
Sample D Male 12.7
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.6
Sample A Female 13.4
Sample B Female 11.8
Sample C Male 11.6
Sample D Male 11.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 18.9
Min nTPM: 13.9
Sample A Male 17.9
Sample B Male 18.0
Sample C Female 18.9
Sample D Female 13.9
Hippocampal formation
nTPM: 16.4
Samples: 4

Max nTPM: 17.3
Min nTPM: 15.4
Sample A Male 15.4
Sample B Male 17.3
Sample C Female 16.3
Sample D Female 16.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68080706 Antisense, RP_040929_01_G05, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org