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ASCC1
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  • ASCC1
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ASCC1
Synonyms ASC1p50, CGI-18, Em:AC022392.3, p50
Gene descriptioni

Full gene name according to HGNC.

Activating signal cointegrator 1 complex subunit 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband q22.1
Chromosome location (bp) 72096032 - 72217134
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

18
Ensembl ENSG00000138303 (version 109)
Entrez gene 51008
HGNC HGNC:24268
UniProt Q8N9N2 (UniProt - Evidence at protein level)
neXtProt NX_Q8N9N2
GeneCards ASCC1
Antibodypedia ASCC1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Plays a role in DNA damage repair as component of the ASCC complex 1. Part of the ASC-1 complex that enhances NF-kappa-B, SRF and AP1 transactivation 2. In cells responding to gastrin-activated paracrine signals, it is involved in the induction of SERPINB2 expression by gastrin. May also play a role in the development of neuromuscular junction.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

DNA damage, DNA repair, Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a subunit of the activating signal cointegrator 1 (ASC-1) complex. The ASC-1 complex is a transcriptional coactivator that plays an important role in gene transactivation by multiple transcription factors including activating protein 1 (AP-1), nuclear factor kappa-B (NF-kB) and serum response factor (SRF). The encoded protein contains an N-terminal KH-type RNA-binding motif which is required for AP-1 transactivation by the ASC-1 complex. Mutations in this gene are associated with Barrett esophagus and esophageal adenocarcinoma. Alternatively spliced transcripts encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Dec 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ASCC1-201
ENSP00000320461
ENST00000317126
Q8N9N2
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
A0A024QZM0
[Target identity:100%; Query identity:100%] Activating signal cointegrator 1 complex subunit 1, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005667 [transcription regulator complex]
GO:0006281 [DNA repair]
GO:0006307 [DNA dealkylation involved in DNA repair]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016607 [nuclear speck]
GO:0031594 [neuromuscular junction]
GO:0032508 [DNA duplex unwinding]
GO:1990391 [DNA repair complex]
Show all
357 aa
41.2 kDa
No 0
ASCC1-202
ENSP00000320810
ENST00000317168
A0A5K1VW55
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
Show all
252 aa
29.3 kDa
No 0
ASCC1-203
ENSP00000339404
ENST00000342444
Q8N9N2
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005667 [transcription regulator complex]
GO:0006281 [DNA repair]
GO:0006307 [DNA dealkylation involved in DNA repair]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016607 [nuclear speck]
GO:0031594 [neuromuscular junction]
GO:0032508 [DNA duplex unwinding]
GO:1990391 [DNA repair complex]
Show all
400 aa
45.5 kDa
No 0
ASCC1-204
ENSP00000378373
ENST00000394915
Q8N9N2
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005667 [transcription regulator complex]
GO:0006281 [DNA repair]
GO:0006307 [DNA dealkylation involved in DNA repair]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016607 [nuclear speck]
GO:0031594 [neuromuscular junction]
GO:0032508 [DNA duplex unwinding]
GO:1990391 [DNA repair complex]
Show all
400 aa
45.5 kDa
No 0
ASCC1-205
ENSP00000378377
ENST00000394919
Q8N9N2
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
A0A024QZM0
[Target identity:100%; Query identity:100%] Activating signal cointegrator 1 complex subunit 1, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005667 [transcription regulator complex]
GO:0006281 [DNA repair]
GO:0006307 [DNA dealkylation involved in DNA repair]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016607 [nuclear speck]
GO:0031594 [neuromuscular junction]
GO:0032508 [DNA duplex unwinding]
GO:1990391 [DNA repair complex]
Show all
357 aa
41.2 kDa
No 0
ASCC1-207
ENSP00000431299
ENST00000486689
H0YCB3
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
Show all
292 aa
32.9 kDa
No 0
ASCC1-209
ENSP00000431573
ENST00000524829
E9PKM6
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
Show all
123 aa
14.2 kDa
No 0
ASCC1-210
ENSP00000435147
ENST00000525286
H0YE76
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
218 aa
24.7 kDa
No 0
ASCC1-211
ENSP00000431419
ENST00000526751
E9PL92
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
Show all
103 aa
12 kDa
No 0
ASCC1-213
ENSP00000432418
ENST00000527593
E9PQZ6
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
Show all
152 aa
17.7 kDa
No 0
ASCC1-214
ENSP00000436409
ENST00000530394
H0YER2
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
145 aa
16.6 kDa
No 0
ASCC1-215
ENSP00000431255
ENST00000530461
E9PM82
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
Show all
124 aa
14.2 kDa
No 0
ASCC1-216
ENSP00000436098
ENST00000531048
E9PR40
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
139 aa
16.5 kDa
No 0
ASCC1-218
ENSP00000431746
ENST00000533958
E9PJM2
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
56 aa
6.7 kDa
No 0
ASCC1-221
ENSP00000500771
ENST00000672121
A0A5F9ZI10
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
Show all
221 aa
25.2 kDa
No 0
ASCC1-222
ENSP00000500488
ENST00000672774
A0A5F9ZHP1
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
Show all
377 aa
43.5 kDa
No 0
ASCC1-224
ENSP00000500074
ENST00000672940
A0A5F9ZH79
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
Show all
317 aa
36.9 kDa
No 0
ASCC1-225
ENSP00000500935
ENST00000672957
Q8N9N2
[Direct mapping] Activating signal cointegrator 1 complex subunit 1
Show all
A0A024QZM0
[Target identity:100%; Query identity:100%] Activating signal cointegrator 1 complex subunit 1, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Digestive system diseases
   Gastrointestinal diseases
   Musculoskeletal diseases
   Other musculoskeletal diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005667 [transcription regulator complex]
GO:0006281 [DNA repair]
GO:0006307 [DNA dealkylation involved in DNA repair]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016607 [nuclear speck]
GO:0031594 [neuromuscular junction]
GO:0032508 [DNA duplex unwinding]
GO:1990391 [DNA repair complex]
Show all
357 aa
41.2 kDa
No 0

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