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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2871.0
nTPM
Monaco:
526.5
nTPM
Schmiedel:
708.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2871.0
HPA sample
nTPM
gdT-cell nTPM: 1588.6
Samples: 6
Max nTPM: 1928.4
Min nTPM: 1226.3
P10809_1007
1928.4
P10809_1022
1386.1
P10809_1041
1897.5
P10809_1060
1226.3
P10809_1077
1515.2
P10809_1098
1578.3
MAIT T-cell nTPM: 2633.5
Samples: 6
Max nTPM: 3074.2
Min nTPM: 2158.9
P10809_1006
2443.6
P10809_1024
3074.2
P10809_1043
2558.5
P10809_1062
2520.5
P10809_1083
2158.9
P10809_1097
3045.3
Memory CD4 T-cell nTPM: 2185.4
Samples: 6
Max nTPM: 2796.5
Min nTPM: 1757.3
P10809_1014
2251.9
P10809_1026
2796.5
P10809_1045
2513.8
P10809_1064
1828.8
P10809_1086
1757.3
P10809_1113
1964.3
Memory CD8 T-cell nTPM: 2037.9
Samples: 5
Max nTPM: 2309.3
Min nTPM: 1834.5
P10809_1012
1993.3
P10809_1027
2309.3
P10809_1046
2202.9
P10809_1065
1834.5
P10809_1111
1849.5
Naive CD4 T-cell nTPM: 2871.0
Samples: 6
Max nTPM: 3663.7
Min nTPM: 1972.6
P10809_1015
2976.3
P10809_1030
3663.7
P10809_1049
2948.8
P10809_1068
3044.0
P10809_1085
1972.6
P10809_1112
2620.6
Naive CD8 T-cell nTPM: 2653.0
Samples: 6
Max nTPM: 3860.0
Min nTPM: 1438.1
P10809_1016
3860.0
P10809_1031
3358.6
P10809_1050
2566.8
P10809_1069
2265.8
P10809_1087
1438.1
P10809_1110
2428.7
T-reg nTPM: 1921.7
Samples: 6
Max nTPM: 2223.4
Min nTPM: 1658.4
P10809_1018
1658.4
P10809_1037
2223.4
P10809_1056
2037.4
P10809_1075
1934.6
P10809_1094
1857.4
P10809_1106
1818.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
526.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 344.5
Samples: 4
Max nTPM: 590.0
Min nTPM: 100.3
RHH5202_R3573
100.3
RHH5230_R3602
392.5
RHH5259_R3631
590.0
RHH5288_R3660
295.1
Effector memory CD8 T-cell nTPM: 179.9
Samples: 4
Max nTPM: 342.4
Min nTPM: 106.8
RHH5203_R3574
139.6
RHH5231_R3603
130.7
RHH5260_R3632
342.4
RHH5289_R3661
106.8
MAIT T-cell nTPM: 329.8
Samples: 4
Max nTPM: 434.7
Min nTPM: 213.4
RHH5233_R3605
213.4
RHH5205_R3576
384.0
RHH5262_R3634
434.7
RHH5297_R3663
287.1
Memory CD4 T-cell TFH nTPM: 204.6
Samples: 4
Max nTPM: 254.5
Min nTPM: 155.1
RHH5300_R3666
198.2
RHH5236_R3608
254.5
RHH5265_R3637
210.6
RHH5208_R3579
155.1
Memory CD4 T-cell Th1 nTPM: 469.9
Samples: 4
Max nTPM: 817.3
Min nTPM: 162.2
RHH5210_R3581
162.2
RHH5302_R3668
403.2
RHH5238_R3610
817.3
RHH5267_R3639
497.0
Memory CD4 T-cell Th1/Th17 nTPM: 320.1
Samples: 4
Max nTPM: 445.2
Min nTPM: 182.1
RHH5303_R3669
215.2
RHH5211_R3582
182.1
RHH5239_R3611
438.0
RHH5268_R3640
445.2
Memory CD4 T-cell Th17 nTPM: 338.9
Samples: 4
Max nTPM: 479.0
Min nTPM: 195.6
RHH5304_R3670
479.0
RHH5212_R3583
195.6
RHH5240_R3612
356.3
RHH5269_R3641
324.6
Memory CD4 T-cell Th2 nTPM: 361.0
Samples: 4
Max nTPM: 587.5
Min nTPM: 239.9
RHH5305_R3671
587.5
RHH5213_R3584
268.3
RHH5241_R3613
239.9
RHH5270_R3642
348.1
Naive CD4 T-cell nTPM: 526.5
Samples: 4
Max nTPM: 628.2
Min nTPM: 370.6
RHH5306_R3672
628.2
RHH5214_R3585
572.9
RHH5242_R3614
370.6
RHH5271_R3643
534.2
Naive CD8 T-cell nTPM: 524.5
Samples: 4
Max nTPM: 850.8
Min nTPM: 205.9
RHH5201_R3572
205.9
RHH5229_R3601
850.8
RHH5258_R3630
329.0
RHH5287_R3659
712.2
Non-Vd2 gdTCR nTPM: 197.9
Samples: 4
Max nTPM: 303.9
Min nTPM: 156.1
RHH5235_R3607
303.9
RHH5264_R3636
156.1
RHH5207_R3578
158.9
RHH5299_R3665
172.8
T-reg nTPM: 316.2
Samples: 4
Max nTPM: 414.8
Min nTPM: 206.3
RHH5301_R3667
320.2
RHH5237_R3609
206.3
RHH5266_R3638
414.8
RHH5209_R3580
323.6
Terminal effector memory CD4 T-cell nTPM: 227.1
Samples: 2
Max nTPM: 285.9
Min nTPM: 168.3
RHH5243_R3615
285.9
RHH5272_R3644
168.3
Terminal effector memory CD8 T-cell nTPM: 239.1
Samples: 4
Max nTPM: 373.8
Min nTPM: 116.8
RHH5232_R3604
116.8
RHH5204_R3575
323.1
RHH5261_R3633
373.8
RHH5296_R3662
142.7
Vd2 gdTCR nTPM: 436.6
Samples: 4
Max nTPM: 658.8
Min nTPM: 240.1
RHH5234_R3606
240.1
RHH5206_R3577
658.8
RHH5263_R3635
475.6
RHH5298_R3664
371.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.