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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.7
nTPM
Monaco:
102.5
nTPM
Schmiedel:
164.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.7
HPA sample
nTPM
gdT-cell nTPM: 38.9
Samples: 6
Max nTPM: 43.8
Min nTPM: 32.7
P10809_1007
33.9
P10809_1022
43.8
P10809_1041
43.5
P10809_1060
39.2
P10809_1077
32.7
P10809_1098
40.5
MAIT T-cell nTPM: 48.7
Samples: 6
Max nTPM: 59.5
Min nTPM: 39.5
P10809_1006
48.1
P10809_1024
44.9
P10809_1043
49.1
P10809_1062
50.8
P10809_1083
39.5
P10809_1097
59.5
Memory CD4 T-cell nTPM: 42.4
Samples: 6
Max nTPM: 50.9
Min nTPM: 35.7
P10809_1014
42.7
P10809_1026
50.9
P10809_1045
35.7
P10809_1064
40.2
P10809_1086
39.9
P10809_1113
45.1
Memory CD8 T-cell nTPM: 43.3
Samples: 5
Max nTPM: 48.1
Min nTPM: 37.0
P10809_1012
42.0
P10809_1027
46.0
P10809_1046
37.0
P10809_1065
43.5
P10809_1111
48.1
Naive CD4 T-cell nTPM: 49.6
Samples: 6
Max nTPM: 61.8
Min nTPM: 35.7
P10809_1015
47.0
P10809_1030
47.8
P10809_1049
58.5
P10809_1068
61.8
P10809_1085
35.7
P10809_1112
46.7
Naive CD8 T-cell nTPM: 45.5
Samples: 6
Max nTPM: 54.1
Min nTPM: 40.2
P10809_1016
42.4
P10809_1031
42.2
P10809_1050
44.3
P10809_1069
49.5
P10809_1087
40.2
P10809_1110
54.1
T-reg nTPM: 57.7
Samples: 6
Max nTPM: 95.1
Min nTPM: 37.1
P10809_1018
37.1
P10809_1037
95.1
P10809_1056
41.0
P10809_1075
59.7
P10809_1094
48.8
P10809_1106
64.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 79.6
Samples: 4
Max nTPM: 91.2
Min nTPM: 72.9
RHH5202_R3573
78.4
RHH5230_R3602
91.2
RHH5259_R3631
72.9
RHH5288_R3660
75.9
Effector memory CD8 T-cell nTPM: 82.9
Samples: 4
Max nTPM: 100.0
Min nTPM: 65.6
RHH5203_R3574
65.6
RHH5231_R3603
72.0
RHH5260_R3632
100.0
RHH5289_R3661
94.1
MAIT T-cell nTPM: 74.3
Samples: 4
Max nTPM: 80.3
Min nTPM: 60.1
RHH5233_R3605
77.8
RHH5205_R3576
80.3
RHH5262_R3634
78.8
RHH5297_R3663
60.1
Memory CD4 T-cell TFH nTPM: 88.3
Samples: 4
Max nTPM: 113.6
Min nTPM: 57.9
RHH5300_R3666
57.9
RHH5236_R3608
108.0
RHH5265_R3637
73.5
RHH5208_R3579
113.6
Memory CD4 T-cell Th1 nTPM: 70.2
Samples: 4
Max nTPM: 79.6
Min nTPM: 59.0
RHH5210_R3581
59.0
RHH5302_R3668
64.9
RHH5238_R3610
79.6
RHH5267_R3639
77.3
Memory CD4 T-cell Th1/Th17 nTPM: 90.8
Samples: 4
Max nTPM: 107.2
Min nTPM: 79.6
RHH5303_R3669
79.6
RHH5211_R3582
85.1
RHH5239_R3611
107.2
RHH5268_R3640
91.2
Memory CD4 T-cell Th17 nTPM: 89.0
Samples: 4
Max nTPM: 110.0
Min nTPM: 80.1
RHH5304_R3670
84.0
RHH5212_R3583
82.0
RHH5240_R3612
110.0
RHH5269_R3641
80.1
Memory CD4 T-cell Th2 nTPM: 69.4
Samples: 4
Max nTPM: 80.9
Min nTPM: 60.4
RHH5305_R3671
66.5
RHH5213_R3584
69.7
RHH5241_R3613
80.9
RHH5270_R3642
60.4
Naive CD4 T-cell nTPM: 90.4
Samples: 4
Max nTPM: 106.5
Min nTPM: 74.2
RHH5306_R3672
74.2
RHH5214_R3585
93.3
RHH5242_R3614
87.6
RHH5271_R3643
106.5
Naive CD8 T-cell nTPM: 102.5
Samples: 4
Max nTPM: 114.4
Min nTPM: 83.2
RHH5201_R3572
114.4
RHH5229_R3601
110.8
RHH5258_R3630
101.6
RHH5287_R3659
83.2
Non-Vd2 gdTCR nTPM: 80.0
Samples: 4
Max nTPM: 128.9
Min nTPM: 48.7
RHH5235_R3607
128.9
RHH5264_R3636
72.3
RHH5207_R3578
70.0
RHH5299_R3665
48.7
T-reg nTPM: 89.8
Samples: 4
Max nTPM: 123.8
Min nTPM: 56.4
RHH5301_R3667
56.4
RHH5237_R3609
123.8
RHH5266_R3638
85.3
RHH5209_R3580
93.8
Terminal effector memory CD4 T-cell nTPM: 97.0
Samples: 2
Max nTPM: 111.7
Min nTPM: 82.2
RHH5243_R3615
111.7
RHH5272_R3644
82.2
Terminal effector memory CD8 T-cell nTPM: 82.2
Samples: 4
Max nTPM: 92.7
Min nTPM: 75.1
RHH5232_R3604
84.0
RHH5204_R3575
76.8
RHH5261_R3633
92.7
RHH5296_R3662
75.1
Vd2 gdTCR nTPM: 72.8
Samples: 4
Max nTPM: 100.7
Min nTPM: 47.8
RHH5234_R3606
63.1
RHH5206_R3577
79.7
RHH5263_R3635
100.7
RHH5298_R3664
47.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
