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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.7
nTPM
Monaco:
83.9
nTPM
Schmiedel:
37.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.7
HPA sample
nTPM
gdT-cell nTPM: 40.1
Samples: 6
Max nTPM: 43.5
Min nTPM: 36.6
P10809_1007
39.2
P10809_1022
43.5
P10809_1041
38.8
P10809_1060
43.0
P10809_1077
36.6
P10809_1098
39.3
MAIT T-cell nTPM: 61.7
Samples: 6
Max nTPM: 74.0
Min nTPM: 54.5
P10809_1006
55.1
P10809_1024
63.4
P10809_1043
58.9
P10809_1062
64.2
P10809_1083
74.0
P10809_1097
54.5
Memory CD4 T-cell nTPM: 55.0
Samples: 6
Max nTPM: 60.4
Min nTPM: 48.5
P10809_1014
54.6
P10809_1026
48.5
P10809_1045
50.8
P10809_1064
60.4
P10809_1086
59.4
P10809_1113
56.3
Memory CD8 T-cell nTPM: 54.0
Samples: 5
Max nTPM: 66.1
Min nTPM: 45.9
P10809_1012
60.6
P10809_1027
66.1
P10809_1046
45.9
P10809_1065
46.1
P10809_1111
51.1
Naive CD4 T-cell nTPM: 56.7
Samples: 6
Max nTPM: 66.2
Min nTPM: 50.2
P10809_1015
57.3
P10809_1030
53.0
P10809_1049
53.3
P10809_1068
66.2
P10809_1085
50.2
P10809_1112
60.4
Naive CD8 T-cell nTPM: 52.5
Samples: 6
Max nTPM: 66.0
Min nTPM: 32.0
P10809_1016
66.0
P10809_1031
32.0
P10809_1050
47.0
P10809_1069
63.7
P10809_1087
50.7
P10809_1110
55.5
T-reg nTPM: 58.0
Samples: 6
Max nTPM: 77.5
Min nTPM: 41.7
P10809_1018
64.4
P10809_1037
63.5
P10809_1056
51.6
P10809_1075
41.7
P10809_1094
49.2
P10809_1106
77.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.2
Samples: 4
Max nTPM: 92.0
Min nTPM: 43.6
RHH5202_R3573
48.5
RHH5230_R3602
43.6
RHH5259_R3631
52.6
RHH5288_R3660
92.0
Effector memory CD8 T-cell nTPM: 40.2
Samples: 4
Max nTPM: 59.6
Min nTPM: 27.2
RHH5203_R3574
59.6
RHH5231_R3603
37.5
RHH5260_R3632
36.4
RHH5289_R3661
27.2
MAIT T-cell nTPM: 66.6
Samples: 4
Max nTPM: 96.3
Min nTPM: 43.5
RHH5233_R3605
70.3
RHH5205_R3576
56.4
RHH5262_R3634
43.5
RHH5297_R3663
96.3
Memory CD4 T-cell TFH nTPM: 83.6
Samples: 4
Max nTPM: 102.6
Min nTPM: 52.7
RHH5300_R3666
98.1
RHH5236_R3608
102.6
RHH5265_R3637
52.7
RHH5208_R3579
80.8
Memory CD4 T-cell Th1 nTPM: 69.4
Samples: 4
Max nTPM: 129.5
Min nTPM: 44.8
RHH5210_R3581
46.7
RHH5302_R3668
129.5
RHH5238_R3610
44.8
RHH5267_R3639
56.6
Memory CD4 T-cell Th1/Th17 nTPM: 68.1
Samples: 4
Max nTPM: 97.9
Min nTPM: 46.9
RHH5303_R3669
97.9
RHH5211_R3582
70.8
RHH5239_R3611
46.9
RHH5268_R3640
56.7
Memory CD4 T-cell Th17 nTPM: 57.5
Samples: 4
Max nTPM: 69.3
Min nTPM: 41.3
RHH5304_R3670
69.3
RHH5212_R3583
60.0
RHH5240_R3612
59.3
RHH5269_R3641
41.3
Memory CD4 T-cell Th2 nTPM: 72.2
Samples: 4
Max nTPM: 98.9
Min nTPM: 53.8
RHH5305_R3671
77.9
RHH5213_R3584
53.8
RHH5241_R3613
98.9
RHH5270_R3642
58.2
Naive CD4 T-cell nTPM: 68.5
Samples: 4
Max nTPM: 102.2
Min nTPM: 49.0
RHH5306_R3672
73.2
RHH5214_R3585
102.2
RHH5242_R3614
49.5
RHH5271_R3643
49.0
Naive CD8 T-cell nTPM: 58.6
Samples: 4
Max nTPM: 75.1
Min nTPM: 42.5
RHH5201_R3572
42.5
RHH5229_R3601
49.3
RHH5258_R3630
67.6
RHH5287_R3659
75.1
Non-Vd2 gdTCR nTPM: 52.9
Samples: 4
Max nTPM: 78.9
Min nTPM: 24.8
RHH5235_R3607
24.8
RHH5264_R3636
60.2
RHH5207_R3578
47.6
RHH5299_R3665
78.9
T-reg nTPM: 66.7
Samples: 4
Max nTPM: 95.4
Min nTPM: 50.8
RHH5301_R3667
95.4
RHH5237_R3609
63.5
RHH5266_R3638
50.8
RHH5209_R3580
57.0
Terminal effector memory CD4 T-cell nTPM: 39.4
Samples: 2
Max nTPM: 53.8
Min nTPM: 24.9
RHH5243_R3615
24.9
RHH5272_R3644
53.8
Terminal effector memory CD8 T-cell nTPM: 73.0
Samples: 4
Max nTPM: 130.1
Min nTPM: 44.6
RHH5232_R3604
44.6
RHH5204_R3575
130.1
RHH5261_R3633
44.9
RHH5296_R3662
72.4
Vd2 gdTCR nTPM: 83.9
Samples: 4
Max nTPM: 132.8
Min nTPM: 50.4
RHH5234_R3606
66.9
RHH5206_R3577
85.6
RHH5263_R3635
50.4
RHH5298_R3664
132.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
