HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:54.3 nTPM
HPA Brain:44.4 nTPM
GTEx:54.3 nTPM
FANTOM5:66.5 Scaled Tags Per Million
Pig:211.1 nTPM
Mouse:160.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042226Antibody HPA048158
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.4
Sample id Sample description nTPM
Hippocampus
nTPM: 40.1
1898 Male, age 80, left hemisphere 49.5
1855 Male, age 76, left hemisphere 41.9
2529 Female, age 94, left hemisphere 40.9
2621 Female, age 67, right hemisphere 38.6
2148 Female, age 91, left hemisphere 35.9
1911 Female, age 85, right hemisphere 33.8
Dentate gyrus
nTPM: 39.6
1927 Female, age 91, both hemispheres 43.7
2530 Female, age 94, left hemisphere 43.5
2010 Male, age 76, both hemispheres 43.0
2528 Male, age 74, both hemispheres 40.1
2246 Female, age 85, both hemispheres 38.2
2531 Female, age 67, both hemispheres 29.4
Entorhinal gyrus
nTPM: 36.5
2764 Male, age 80, right hemisphere 40.8
2117 Female, age 91, right hemisphere 40.6
1938 Female, age 85, left hemisphere 38.8
1787 Male, age 76, left hemisphere 37.2
2686 Male, age 75, right hemisphere 31.0
2613 Female, age 94, left hemisphere 30.7
Hippocampus, CA1
nTPM: 41.4
2527 Male, age 74, both hemispheres 47.4
1873 Female, age 85, both hemispheres 45.0
2749 Male, age 80, left hemisphere 44.9
2082 Female, age 91, right hemisphere 35.4
2045 Male, age 76, both hemispheres 34.3
Hippocampus, CA2
nTPM: 44.4
1963 Male, age 80, left hemisphere 53.9
2249 Male, age 74, both hemispheres 52.2
1892 Male, age 76, both hemispheres 44.7
2437 Female, age 94, left hemisphere 43.3
1940 Female, age 85, left hemisphere 41.5
2113 Female, age 91, right hemisphere 31.0
Hippocampus, CA3
nTPM: 39.9
2436 Male, age 74, both hemispheres 72.7
1867 Male, age 76, both hemispheres 44.9
1891 Female, age 85, both hemispheres 37.9
2137 Male, age 80, left hemisphere 36.4
2620 Female, age 94, left hemisphere 26.0
2861 Female, age 67, both hemispheres 21.5
Parahippocampal cortex
nTPM: 36.3
2250 Female, age 67, right hemisphere 40.8
2532 Female, age 72, left hemisphere 40.2
1850 Male, age 80, both hemispheres 39.6
1933 Female, age 85, both hemispheres 38.1
2018 Male, age 76, both hemispheres 37.9
2692 Male, age 74, both hemispheres 37.8
2245 Female, age 91, both hemispheres 36.7
1990 Female, age 91, right hemisphere 36.3
2693 Female, age 94, both hemispheres 32.6
2622 Female, age 67, right hemisphere 23.3
Perirhinal gyrus
nTPM: 40.1
2521 Female, age 94, right hemisphere 44.7
1841 Female, age 85, right hemisphere 42.8
1847 Female, age 91, left hemisphere 40.2
1794 Male, age 80, right hemisphere 38.7
2848 Male, age 76, right hemisphere 34.3
Subiculum
nTPM: 39.1
1901 Male, age 80, both hemispheres 46.7
2438 Female, age 94, left hemisphere 43.3
1977 Female, age 85, both hemispheres 43.0
2619 Male, age 74, both hemispheres 37.6
2042 Male, age 76, both hemispheres 33.5
2729 Female, age 91, right hemisphere 30.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.3
Samples: 197

Max nTPM: 192.8
Min nTPM: 28.8
Std nTPM: 16.2
Median nTPM: 52.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 192.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 107.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 104.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 100.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 97.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 90.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 86.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 82.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 81.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 76.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.5
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 61.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 211.1
Pig sample Sample description nTPM
Subiculum
nTPM: 192.6
Samples: 4

Max nTPM: 270.0
Min nTPM: 147.6
Sample A Female 270.0
Sample B Female 184.6
Sample C Male 168.3
Sample D Male 147.6
Dorsal hippocampus
nTPM: 210.6
Samples: 4

Max nTPM: 278.0
Min nTPM: 159.2
Sample A Female 278.0
Sample B Female 167.2
Sample C Male 237.9
Sample D Male 159.2
Entorhinal cortex
nTPM: 211.1
Samples: 4

Max nTPM: 290.9
Min nTPM: 158.9
Sample A Female 198.4
Sample B Female 290.9
Sample C Male 196.1
Sample D Male 158.9
Ventral hippocampus
nTPM: 171.1
Samples: 4

Max nTPM: 191.7
Min nTPM: 149.3
Sample A Female 184.7
Sample B Female 158.6
Sample C Male 191.7
Sample D Male 149.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 160.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 160.1
Samples: 4

Max nTPM: 172.8
Min nTPM: 140.3
Sample A Male 172.8
Sample B Male 168.9
Sample C Female 158.3
Sample D Female 140.3
Hippocampal formation
nTPM: 157.4
Samples: 4

Max nTPM: 171.2
Min nTPM: 135.4
Sample A Male 171.2
Sample B Male 153.8
Sample C Female 135.4
Sample D Female 169.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
74000678 Antisense, RP_051219_02_E10, Mouse strain C57BL/6J (56 days, male) 0.6

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