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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
116.7
nTPM
GTEx:
116.7
nTPM
FANTOM5:
84.7
Scaled Tags Per Million
Pig:
219.6
nTPM
Mouse:
156.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
116.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 116.7
Samples: 105
Max nTPM: 192.6
Min nTPM: 60.7
Std nTPM: 29.4
Median nTPM: 0.0
354_1
81 years, female
192.6
218_1
71 years, female
190.1
351_1
91 years, male
185.0
352_1
62 years, male
181.5
377_1
82 years, female
170.4
356_1
87 years, female
169.2
243_1
75 years, male
165.3
355_1
70 years, female
160.5
452_1
88 years, female
159.6
319_1
81 years, male
158.3
394_1
75 years, female
157.1
386_1
76 years, male
155.8
163_1
78 years, male
154.9
99_1
64 years, male
154.0
350_1
84 years, female
153.4
321_1
62 years, female
152.1
349_1
83 years, male
152.1
506_1
65 years, male
147.2
375_1
74 years, female
145.8
384_1
83 years, male
145.2
35_1
74 years, female
145.1
376_1
75 years, female
144.1
237_1
82 years, male
143.0
6_1
73 years, female
142.8
335_1
73 years, female
141.5
172_1
72 years, female
140.8
447_1
81 years, male
139.2
322_1
76 years, male
138.7
2_1
77 years, female
137.8
286_1
68 years, female
136.9
115_1
83 years, male
133.6
379_1
60 years, male
133.3
503_1
68 years, male
131.9
4_1
88 years, female
131.7
295_1
61 years, female
130.5
396_1
62 years, male
129.6
293_1
68 years, female
126.9
177_1
74 years, male
126.4
425_1
59 years, female
123.6
490_1
67 years, female
121.5
173_1
67 years, male
120.3
389_1
86 years, female
120.3
517_1
88 years, male
119.5
229_1
69 years, female
116.6
320_1
89 years, female
115.8
313_1
79 years, female
115.3
292_1
71 years, male
115.1
9_1
66 years, female
115.0
526_1
61 years, male
113.4
315_1
62 years, female
112.1
264_1
73 years, female
111.7
406_1
79 years, male
111.0
318_1
68 years, male
110.3
153_1
70 years, female
110.2
480_1
63 years, male
110.0
251_1
78 years, male
109.6
348_1
84 years, male
107.7
317_1
60 years, male
107.6
347_1
72 years, male
107.1
266_1
85 years, male
106.7
265_1
87 years, male
105.4
120_1
70 years, female
105.3
142_1
61 years, female
103.3
291_1
76 years, male
103.2
404_1
82 years, female
102.6
162_1
79 years, female
102.4
491_1
89 years, female
101.4
415_1
77 years, female
101.3
81_1
67 years, male
100.2
17_1
71 years, male
100.0
405_1
91 years, male
99.4
217_1
76 years, male
99.3
189_1
76 years, male
98.9
145_1
84 years, male
97.7
246_1
77 years, male
97.0
254_1
77 years, female
95.6
126_1
63 years, male
95.2
353_1
82 years, female
93.1
288_1
66 years, female
92.9
18_1
88 years, male
92.8
137_1
83 years, male
91.8
468_1
89 years, male
91.2
109_1
81 years, female
90.4
119_1
70 years, female
90.2
324_1
76 years, male
89.8
117_1
61 years, male
89.4
307_1
66 years, female
89.0
42_1
85 years, male
88.8
311_1
78 years, male
88.2
43_1
64 years, female
86.6
414_1
84 years, female
86.6
316_1
62 years, male
86.1
499_1
55 years, female
84.5
518_1
75 years, female
82.5
41_1
94 years, female
80.8
413_1
59 years, female
78.7
495_1
57 years, female
77.5
314_1
67 years, male
77.2
139_1
64 years, female
77.0
308_1
70 years, female
76.7
501_1
88 years, male
76.4
89_1
63 years, male
75.7
466_1
57 years, female
73.6
32_1
67 years, male
72.8
149_1
88 years, male
60.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
