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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.1
nTPM
Monaco:
164.5
nTPM
Schmiedel:
64.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.1
HPA sample
nTPM
gdT-cell nTPM: 24.9
Samples: 6
Max nTPM: 37.5
Min nTPM: 13.8
P10809_1007
22.0
P10809_1022
37.5
P10809_1041
18.9
P10809_1060
13.8
P10809_1077
30.6
P10809_1098
26.5
MAIT T-cell nTPM: 15.6
Samples: 6
Max nTPM: 24.9
Min nTPM: 6.4
P10809_1006
18.4
P10809_1024
24.9
P10809_1043
10.8
P10809_1062
12.2
P10809_1083
20.8
P10809_1097
6.4
Memory CD4 T-cell nTPM: 19.5
Samples: 6
Max nTPM: 31.9
Min nTPM: 10.1
P10809_1014
15.9
P10809_1026
18.1
P10809_1045
12.3
P10809_1064
28.9
P10809_1086
31.9
P10809_1113
10.1
Memory CD8 T-cell nTPM: 22.6
Samples: 5
Max nTPM: 27.4
Min nTPM: 17.8
P10809_1012
22.2
P10809_1027
23.1
P10809_1046
17.8
P10809_1065
27.4
P10809_1111
22.5
Naive CD4 T-cell nTPM: 10.9
Samples: 6
Max nTPM: 19.7
Min nTPM: 7.1
P10809_1015
11.5
P10809_1030
7.1
P10809_1049
7.4
P10809_1068
10.8
P10809_1085
19.7
P10809_1112
8.7
Naive CD8 T-cell nTPM: 18.3
Samples: 6
Max nTPM: 27.6
Min nTPM: 11.1
P10809_1016
11.9
P10809_1031
24.7
P10809_1050
14.8
P10809_1069
19.9
P10809_1087
27.6
P10809_1110
11.1
T-reg nTPM: 27.1
Samples: 6
Max nTPM: 46.2
Min nTPM: 9.4
P10809_1018
30.4
P10809_1037
46.2
P10809_1056
22.6
P10809_1075
33.8
P10809_1094
9.4
P10809_1106
19.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 77.5
Samples: 4
Max nTPM: 90.2
Min nTPM: 66.1
RHH5202_R3573
66.1
RHH5230_R3602
90.2
RHH5259_R3631
75.2
RHH5288_R3660
78.3
Effector memory CD8 T-cell nTPM: 152.7
Samples: 4
Max nTPM: 193.5
Min nTPM: 57.0
RHH5203_R3574
193.5
RHH5231_R3603
184.6
RHH5260_R3632
175.6
RHH5289_R3661
57.0
MAIT T-cell nTPM: 80.5
Samples: 4
Max nTPM: 90.4
Min nTPM: 67.8
RHH5233_R3605
90.4
RHH5205_R3576
76.9
RHH5262_R3634
67.8
RHH5297_R3663
86.9
Memory CD4 T-cell TFH nTPM: 75.6
Samples: 4
Max nTPM: 132.7
Min nTPM: 16.5
RHH5300_R3666
73.6
RHH5236_R3608
132.7
RHH5265_R3637
79.7
RHH5208_R3579
16.5
Memory CD4 T-cell Th1 nTPM: 68.7
Samples: 4
Max nTPM: 93.9
Min nTPM: 34.8
RHH5210_R3581
34.8
RHH5302_R3668
59.8
RHH5238_R3610
86.2
RHH5267_R3639
93.9
Memory CD4 T-cell Th1/Th17 nTPM: 66.7
Samples: 4
Max nTPM: 100.8
Min nTPM: 46.4
RHH5303_R3669
46.4
RHH5211_R3582
58.4
RHH5239_R3611
100.8
RHH5268_R3640
61.0
Memory CD4 T-cell Th17 nTPM: 84.7
Samples: 4
Max nTPM: 103.1
Min nTPM: 48.5
RHH5304_R3670
48.5
RHH5212_R3583
89.4
RHH5240_R3612
103.1
RHH5269_R3641
97.8
Memory CD4 T-cell Th2 nTPM: 79.3
Samples: 4
Max nTPM: 91.5
Min nTPM: 49.9
RHH5305_R3671
85.1
RHH5213_R3584
90.8
RHH5241_R3613
49.9
RHH5270_R3642
91.5
Naive CD4 T-cell nTPM: 53.1
Samples: 4
Max nTPM: 73.8
Min nTPM: 35.2
RHH5306_R3672
35.2
RHH5214_R3585
35.9
RHH5242_R3614
73.8
RHH5271_R3643
67.5
Naive CD8 T-cell nTPM: 27.6
Samples: 4
Max nTPM: 40.5
Min nTPM: 17.0
RHH5201_R3572
17.0
RHH5229_R3601
40.5
RHH5258_R3630
25.4
RHH5287_R3659
27.4
Non-Vd2 gdTCR nTPM: 164.5
Samples: 4
Max nTPM: 179.3
Min nTPM: 141.5
RHH5235_R3607
179.3
RHH5264_R3636
165.1
RHH5207_R3578
141.5
RHH5299_R3665
172.0
T-reg nTPM: 77.4
Samples: 4
Max nTPM: 99.2
Min nTPM: 56.6
RHH5301_R3667
56.6
RHH5237_R3609
99.2
RHH5266_R3638
93.8
RHH5209_R3580
59.9
Terminal effector memory CD4 T-cell nTPM: 140.6
Samples: 2
Max nTPM: 160.8
Min nTPM: 120.4
RHH5243_R3615
160.8
RHH5272_R3644
120.4
Terminal effector memory CD8 T-cell nTPM: 140.6
Samples: 4
Max nTPM: 171.0
Min nTPM: 97.7
RHH5232_R3604
156.3
RHH5204_R3575
137.3
RHH5261_R3633
171.0
RHH5296_R3662
97.7
Vd2 gdTCR nTPM: 113.1
Samples: 4
Max nTPM: 162.5
Min nTPM: 90.7
RHH5234_R3606
104.3
RHH5206_R3577
162.5
RHH5263_R3635
94.9
RHH5298_R3664
90.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
