HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.1 nTPM
HPA Brain:50.5 nTPM
GTEx:13.1 nTPM
FANTOM5:17.7 Scaled Tags Per Million
Pig:37.4 nTPM
Mouse:49.6 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.5
Sample id Sample description nTPM
Hippocampus
nTPM: 39.2
2148 Female, age 91, left hemisphere 60.2
2621 Female, age 67, right hemisphere 44.9
1855 Male, age 76, left hemisphere 40.1
1898 Male, age 80, left hemisphere 36.1
1911 Female, age 85, right hemisphere 27.5
2529 Female, age 94, left hemisphere 26.8
Dentate gyrus
nTPM: 48.4
2531 Female, age 67, both hemispheres 69.0
1927 Female, age 91, both hemispheres 57.6
2010 Male, age 76, both hemispheres 50.9
2528 Male, age 74, both hemispheres 40.6
2530 Female, age 94, left hemisphere 37.7
2246 Female, age 85, both hemispheres 34.5
Entorhinal gyrus
nTPM: 45.7
1787 Male, age 76, left hemisphere 54.0
2764 Male, age 80, right hemisphere 50.9
2686 Male, age 75, right hemisphere 49.0
2613 Female, age 94, left hemisphere 44.8
2117 Female, age 91, right hemisphere 38.1
1938 Female, age 85, left hemisphere 37.1
Hippocampus, CA1
nTPM: 42.8
2045 Male, age 76, both hemispheres 73.5
1873 Female, age 85, both hemispheres 36.6
2749 Male, age 80, left hemisphere 36.1
2082 Female, age 91, right hemisphere 35.6
2527 Male, age 74, both hemispheres 32.3
Hippocampus, CA2
nTPM: 37.4
1892 Male, age 76, both hemispheres 54.6
2437 Female, age 94, left hemisphere 49.5
1940 Female, age 85, left hemisphere 33.6
1963 Male, age 80, left hemisphere 32.3
2113 Female, age 91, right hemisphere 32.0
2249 Male, age 74, both hemispheres 22.6
Hippocampus, CA3
nTPM: 50.4
2620 Female, age 94, left hemisphere 80.7
2861 Female, age 67, both hemispheres 74.4
1867 Male, age 76, both hemispheres 61.0
1891 Female, age 85, both hemispheres 32.8
2137 Male, age 80, left hemisphere 30.5
2436 Male, age 74, both hemispheres 23.4
Parahippocampal cortex
nTPM: 44.8
2693 Female, age 94, both hemispheres 69.7
2622 Female, age 67, right hemisphere 51.7
2245 Female, age 91, both hemispheres 49.0
2018 Male, age 76, both hemispheres 42.3
2532 Female, age 72, left hemisphere 41.0
1990 Female, age 91, right hemisphere 40.4
1933 Female, age 85, both hemispheres 40.1
1850 Male, age 80, both hemispheres 39.6
2250 Female, age 67, right hemisphere 38.9
2692 Male, age 74, both hemispheres 35.6
Perirhinal gyrus
nTPM: 50.5
2521 Female, age 94, right hemisphere 61.2
2848 Male, age 76, right hemisphere 55.5
1847 Female, age 91, left hemisphere 50.2
1794 Male, age 80, right hemisphere 46.8
1841 Female, age 85, right hemisphere 38.7
Subiculum
nTPM: 37.0
2729 Female, age 91, right hemisphere 47.6
2619 Male, age 74, both hemispheres 40.4
1977 Female, age 85, both hemispheres 37.8
2042 Male, age 76, both hemispheres 36.9
2438 Female, age 94, left hemisphere 30.5
1901 Male, age 80, both hemispheres 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.1
Samples: 197

Max nTPM: 29.9
Min nTPM: 2.9
Std nTPM: 5.4
Median nTPM: 12.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 29.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 27.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 25.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 24.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 24.6
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 24.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 23.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 22.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 21.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.7
FF:10153-102I9 76 years, female 19.8
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.4
Pig sample Sample description nTPM
Subiculum
nTPM: 22.4
Samples: 4

Max nTPM: 31.6
Min nTPM: 15.4
Sample A Female 31.6
Sample B Female 21.1
Sample C Male 21.4
Sample D Male 15.4
Dorsal hippocampus
nTPM: 37.4
Samples: 4

Max nTPM: 52.1
Min nTPM: 25.9
Sample A Female 52.1
Sample B Female 45.6
Sample C Male 26.0
Sample D Male 25.9
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 16.5
Min nTPM: 13.6
Sample A Female 14.6
Sample B Female 14.9
Sample C Male 16.5
Sample D Male 13.6
Ventral hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 48.4
Min nTPM: 22.5
Sample A Female 31.0
Sample B Female 22.5
Sample C Male 30.4
Sample D Male 48.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.6
Samples: 4

Max nTPM: 54.1
Min nTPM: 44.0
Sample A Male 44.0
Sample B Male 49.1
Sample C Female 51.3
Sample D Female 54.1
Hippocampal formation
nTPM: 36.1
Samples: 4

Max nTPM: 38.6
Min nTPM: 32.6
Sample A Male 37.2
Sample B Male 36.1
Sample C Female 32.6
Sample D Female 38.6

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