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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.0
nTPM
Monaco:
25.3
nTPM
Schmiedel:
22.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.0
HPA sample
nTPM
gdT-cell nTPM: 10.7
Samples: 6
Max nTPM: 15.3
Min nTPM: 5.9
P10809_1007
5.9
P10809_1022
11.2
P10809_1041
14.0
P10809_1060
8.8
P10809_1077
9.2
P10809_1098
15.3
MAIT T-cell nTPM: 9.0
Samples: 6
Max nTPM: 16.6
Min nTPM: 5.0
P10809_1006
5.0
P10809_1024
13.2
P10809_1043
7.2
P10809_1062
5.2
P10809_1083
6.8
P10809_1097
16.6
Memory CD4 T-cell nTPM: 10.8
Samples: 6
Max nTPM: 13.9
Min nTPM: 7.2
P10809_1014
7.2
P10809_1026
8.8
P10809_1045
10.1
P10809_1064
13.9
P10809_1086
11.2
P10809_1113
13.8
Memory CD8 T-cell nTPM: 9.7
Samples: 5
Max nTPM: 12.7
Min nTPM: 4.8
P10809_1012
10.0
P10809_1027
8.4
P10809_1046
12.7
P10809_1065
4.8
P10809_1111
12.4
Naive CD4 T-cell nTPM: 11.9
Samples: 6
Max nTPM: 17.9
Min nTPM: 9.7
P10809_1015
10.1
P10809_1030
17.9
P10809_1049
10.7
P10809_1068
11.1
P10809_1085
9.7
P10809_1112
11.8
Naive CD8 T-cell nTPM: 12.0
Samples: 6
Max nTPM: 14.1
Min nTPM: 5.8
P10809_1016
12.2
P10809_1031
5.8
P10809_1050
14.0
P10809_1069
12.8
P10809_1087
14.1
P10809_1110
13.1
T-reg nTPM: 11.8
Samples: 6
Max nTPM: 18.9
Min nTPM: 6.5
P10809_1018
7.5
P10809_1037
18.9
P10809_1056
8.0
P10809_1075
6.5
P10809_1094
12.3
P10809_1106
17.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 18.5
Samples: 4
Max nTPM: 25.7
Min nTPM: 6.8
RHH5202_R3573
20.6
RHH5230_R3602
6.8
RHH5259_R3631
25.7
RHH5288_R3660
21.0
Effector memory CD8 T-cell nTPM: 10.8
Samples: 4
Max nTPM: 17.3
Min nTPM: 8.1
RHH5203_R3574
8.3
RHH5231_R3603
8.1
RHH5260_R3632
9.4
RHH5289_R3661
17.3
MAIT T-cell nTPM: 17.0
Samples: 4
Max nTPM: 18.5
Min nTPM: 15.6
RHH5233_R3605
15.6
RHH5205_R3576
18.5
RHH5262_R3634
16.8
RHH5297_R3663
17.0
Memory CD4 T-cell TFH nTPM: 19.1
Samples: 4
Max nTPM: 26.4
Min nTPM: 13.9
RHH5300_R3666
18.9
RHH5236_R3608
13.9
RHH5265_R3637
17.3
RHH5208_R3579
26.4
Memory CD4 T-cell Th1 nTPM: 15.8
Samples: 4
Max nTPM: 20.5
Min nTPM: 9.6
RHH5210_R3581
9.6
RHH5302_R3668
16.7
RHH5238_R3610
20.5
RHH5267_R3639
16.4
Memory CD4 T-cell Th1/Th17 nTPM: 15.1
Samples: 4
Max nTPM: 24.6
Min nTPM: 10.3
RHH5303_R3669
24.6
RHH5211_R3582
10.3
RHH5239_R3611
12.1
RHH5268_R3640
13.4
Memory CD4 T-cell Th17 nTPM: 18.8
Samples: 4
Max nTPM: 24.6
Min nTPM: 9.2
RHH5304_R3670
23.5
RHH5212_R3583
9.2
RHH5240_R3612
17.8
RHH5269_R3641
24.6
Memory CD4 T-cell Th2 nTPM: 21.6
Samples: 4
Max nTPM: 31.2
Min nTPM: 11.2
RHH5305_R3671
23.8
RHH5213_R3584
20.1
RHH5241_R3613
31.2
RHH5270_R3642
11.2
Naive CD4 T-cell nTPM: 19.4
Samples: 4
Max nTPM: 23.6
Min nTPM: 13.4
RHH5306_R3672
23.6
RHH5214_R3585
19.8
RHH5242_R3614
13.4
RHH5271_R3643
20.9
Naive CD8 T-cell nTPM: 25.4
Samples: 4
Max nTPM: 31.3
Min nTPM: 18.3
RHH5201_R3572
31.3
RHH5229_R3601
27.3
RHH5258_R3630
18.3
RHH5287_R3659
24.5
Non-Vd2 gdTCR nTPM: 12.5
Samples: 4
Max nTPM: 16.3
Min nTPM: 5.6
RHH5235_R3607
5.6
RHH5264_R3636
15.5
RHH5207_R3578
12.7
RHH5299_R3665
16.3
T-reg nTPM: 15.0
Samples: 4
Max nTPM: 18.9
Min nTPM: 12.7
RHH5301_R3667
18.9
RHH5237_R3609
12.7
RHH5266_R3638
14.8
RHH5209_R3580
13.5
Terminal effector memory CD4 T-cell nTPM: 9.7
Samples: 2
Max nTPM: 10.8
Min nTPM: 8.5
RHH5243_R3615
10.8
RHH5272_R3644
8.5
Terminal effector memory CD8 T-cell nTPM: 13.1
Samples: 4
Max nTPM: 18.0
Min nTPM: 9.7
RHH5232_R3604
13.6
RHH5204_R3575
9.7
RHH5261_R3633
11.2
RHH5296_R3662
18.0
Vd2 gdTCR nTPM: 11.8
Samples: 4
Max nTPM: 14.6
Min nTPM: 6.0
RHH5234_R3606
12.3
RHH5206_R3577
14.6
RHH5263_R3635
6.0
RHH5298_R3664
14.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
