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RASGEF1B
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  • RASGEF1B
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RASGEF1B
Synonyms FLJ31695, GPIG4
Gene descriptioni

Full gene name according to HGNC.

RasGEF domain family member 1B
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband
Chromosome location (bp) 81426393 - 82044244
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000138670 (version 109)
Entrez gene 153020
HGNC HGNC:24881
UniProt Q0VAM2 (UniProt - Evidence at protein level)
neXtProt NX_Q0VAM2
GeneCards RASGEF1B
Antibodypedia RASGEF1B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Guanine nucleotide exchange factor (GEF) with specificity for RAP2A, it doesn't seems to activate other Ras family proteins (in vitro).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Guanine-nucleotide releasing factor
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of catalytic activity and small GTPase mediated signal transduction. Predicted to be located in early endosome; late endosome; and midbody. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RASGEF1B-201
ENSP00000264400
ENST00000264400
Q0VAM2
[Direct mapping] Ras-GEF domain-containing family member 1B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005768 [endosome]
GO:0005769 [early endosome]
GO:0005770 [late endosome]
GO:0005886 [plasma membrane]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0030496 [midbody]
GO:0043547 [positive regulation of GTPase activity]
Show all
473 aa
55.4 kDa
No 0
RASGEF1B-202
ENSP00000338437
ENST00000335927
Q0VAM2
[Direct mapping] Ras-GEF domain-containing family member 1B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005768 [endosome]
GO:0005769 [early endosome]
GO:0005770 [late endosome]
GO:0005886 [plasma membrane]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0030496 [midbody]
GO:0043547 [positive regulation of GTPase activity]
Show all
431 aa
50.3 kDa
No 0
RASGEF1B-203
ENSP00000398763
ENST00000436139
Q8N437
[Direct mapping] RASGEF1B protein; Ras-GEF domain-containing family member 1B
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
210 aa
24.1 kDa
No 0
RASGEF1B-204
ENSP00000426929
ENST00000504863
D6RE71
[Direct mapping] Ras-GEF domain-containing family member 1B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
232 aa
26.9 kDa
No 0
RASGEF1B-207
ENSP00000425393
ENST00000509081
Q0VAM2
[Direct mapping] Ras-GEF domain-containing family member 1B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005515 [protein binding]
GO:0005768 [endosome]
GO:0005769 [early endosome]
GO:0005770 [late endosome]
GO:0005886 [plasma membrane]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0030496 [midbody]
GO:0043547 [positive regulation of GTPase activity]
Show all
472 aa
55.2 kDa
No 0
RASGEF1B-211
ENSP00000490814
ENST00000514050
A0A1B0GW78
[Direct mapping] Ras-GEF domain-containing family member 1B
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Show all
119 aa
13.3 kDa
Yes 1
RASGEF1B-213
ENSP00000490436
ENST00000638048
A0A1B0GVA7
[Direct mapping] Ras-GEF domain-containing family member 1B
Show all
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
560 aa
64.9 kDa
Yes 0

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