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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.6
nTPM
Monaco:
231.4
nTPM
Schmiedel:
98.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.6
HPA sample
nTPM
gdT-cell nTPM: 65.3
Samples: 6
Max nTPM: 80.1
Min nTPM: 53.5
P10809_1007
54.4
P10809_1022
76.7
P10809_1041
80.1
P10809_1060
53.5
P10809_1077
56.5
P10809_1098
70.6
MAIT T-cell nTPM: 80.6
Samples: 6
Max nTPM: 119.1
Min nTPM: 60.1
P10809_1006
67.8
P10809_1024
119.1
P10809_1043
83.8
P10809_1062
71.9
P10809_1083
60.1
P10809_1097
81.0
Memory CD4 T-cell nTPM: 57.8
Samples: 6
Max nTPM: 71.4
Min nTPM: 41.7
P10809_1014
58.1
P10809_1026
55.3
P10809_1045
71.4
P10809_1064
41.7
P10809_1086
59.2
P10809_1113
61.2
Memory CD8 T-cell nTPM: 64.3
Samples: 5
Max nTPM: 83.4
Min nTPM: 50.1
P10809_1012
60.0
P10809_1027
83.4
P10809_1046
68.2
P10809_1065
50.1
P10809_1111
59.7
Naive CD4 T-cell nTPM: 57.1
Samples: 6
Max nTPM: 64.6
Min nTPM: 52.5
P10809_1015
54.1
P10809_1030
59.3
P10809_1049
64.6
P10809_1068
58.2
P10809_1085
54.0
P10809_1112
52.5
Naive CD8 T-cell nTPM: 54.8
Samples: 6
Max nTPM: 61.8
Min nTPM: 47.5
P10809_1016
47.5
P10809_1031
51.3
P10809_1050
61.8
P10809_1069
53.1
P10809_1087
55.6
P10809_1110
59.6
T-reg nTPM: 52.8
Samples: 6
Max nTPM: 74.7
Min nTPM: 46.5
P10809_1018
49.1
P10809_1037
74.7
P10809_1056
48.9
P10809_1075
48.6
P10809_1094
49.2
P10809_1106
46.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
231.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 199.2
Samples: 4
Max nTPM: 246.5
Min nTPM: 169.1
RHH5202_R3573
180.9
RHH5230_R3602
169.1
RHH5259_R3631
246.5
RHH5288_R3660
200.1
Effector memory CD8 T-cell nTPM: 207.4
Samples: 4
Max nTPM: 222.6
Min nTPM: 185.7
RHH5203_R3574
185.7
RHH5231_R3603
213.2
RHH5260_R3632
208.1
RHH5289_R3661
222.6
MAIT T-cell nTPM: 215.0
Samples: 4
Max nTPM: 244.2
Min nTPM: 195.4
RHH5233_R3605
220.3
RHH5205_R3576
244.2
RHH5262_R3634
200.1
RHH5297_R3663
195.4
Memory CD4 T-cell TFH nTPM: 179.8
Samples: 4
Max nTPM: 215.2
Min nTPM: 161.5
RHH5300_R3666
175.4
RHH5236_R3608
161.5
RHH5265_R3637
215.2
RHH5208_R3579
166.9
Memory CD4 T-cell Th1 nTPM: 208.8
Samples: 4
Max nTPM: 265.0
Min nTPM: 163.1
RHH5210_R3581
174.8
RHH5302_R3668
163.1
RHH5238_R3610
265.0
RHH5267_R3639
232.4
Memory CD4 T-cell Th1/Th17 nTPM: 214.6
Samples: 4
Max nTPM: 272.6
Min nTPM: 179.1
RHH5303_R3669
183.4
RHH5211_R3582
223.1
RHH5239_R3611
272.6
RHH5268_R3640
179.1
Memory CD4 T-cell Th17 nTPM: 231.4
Samples: 4
Max nTPM: 264.5
Min nTPM: 207.2
RHH5304_R3670
215.0
RHH5212_R3583
238.8
RHH5240_R3612
264.5
RHH5269_R3641
207.2
Memory CD4 T-cell Th2 nTPM: 212.8
Samples: 4
Max nTPM: 264.7
Min nTPM: 181.2
RHH5305_R3671
197.2
RHH5213_R3584
264.7
RHH5241_R3613
208.2
RHH5270_R3642
181.2
Naive CD4 T-cell nTPM: 193.8
Samples: 4
Max nTPM: 219.2
Min nTPM: 145.0
RHH5306_R3672
195.9
RHH5214_R3585
215.2
RHH5242_R3614
219.2
RHH5271_R3643
145.0
Naive CD8 T-cell nTPM: 198.2
Samples: 4
Max nTPM: 241.6
Min nTPM: 158.9
RHH5201_R3572
206.9
RHH5229_R3601
241.6
RHH5258_R3630
158.9
RHH5287_R3659
185.5
Non-Vd2 gdTCR nTPM: 206.0
Samples: 4
Max nTPM: 235.6
Min nTPM: 160.5
RHH5235_R3607
220.2
RHH5264_R3636
235.6
RHH5207_R3578
207.6
RHH5299_R3665
160.5
T-reg nTPM: 199.2
Samples: 4
Max nTPM: 233.8
Min nTPM: 135.2
RHH5301_R3667
135.2
RHH5237_R3609
233.8
RHH5266_R3638
225.5
RHH5209_R3580
202.4
Terminal effector memory CD4 T-cell nTPM: 193.7
Samples: 2
Max nTPM: 195.7
Min nTPM: 191.6
RHH5243_R3615
195.7
RHH5272_R3644
191.6
Terminal effector memory CD8 T-cell nTPM: 209.2
Samples: 4
Max nTPM: 254.0
Min nTPM: 169.2
RHH5232_R3604
254.0
RHH5204_R3575
179.8
RHH5261_R3633
233.7
RHH5296_R3662
169.2
Vd2 gdTCR nTPM: 198.7
Samples: 4
Max nTPM: 272.3
Min nTPM: 169.2
RHH5234_R3606
169.2
RHH5206_R3577
180.8
RHH5263_R3635
272.3
RHH5298_R3664
172.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
