We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.8
nTPM
Monaco:
150.2
nTPM
Schmiedel:
67.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.8
HPA sample
nTPM
gdT-cell nTPM: 62.0
Samples: 6
Max nTPM: 86.0
Min nTPM: 39.9
P10809_1007
39.9
P10809_1022
86.0
P10809_1041
58.9
P10809_1060
52.9
P10809_1077
66.2
P10809_1098
67.9
MAIT T-cell nTPM: 67.5
Samples: 6
Max nTPM: 93.9
Min nTPM: 40.9
P10809_1006
40.9
P10809_1024
93.9
P10809_1043
74.8
P10809_1062
66.4
P10809_1083
64.9
P10809_1097
64.1
Memory CD4 T-cell nTPM: 78.5
Samples: 6
Max nTPM: 103.5
Min nTPM: 55.0
P10809_1014
55.0
P10809_1026
103.5
P10809_1045
94.2
P10809_1064
77.7
P10809_1086
65.8
P10809_1113
74.7
Memory CD8 T-cell nTPM: 61.7
Samples: 5
Max nTPM: 68.2
Min nTPM: 55.3
P10809_1012
55.3
P10809_1027
63.7
P10809_1046
68.2
P10809_1065
56.9
P10809_1111
64.6
Naive CD4 T-cell nTPM: 65.3
Samples: 6
Max nTPM: 90.9
Min nTPM: 50.1
P10809_1015
50.1
P10809_1030
90.9
P10809_1049
80.1
P10809_1068
55.3
P10809_1085
54.3
P10809_1112
60.9
Naive CD8 T-cell nTPM: 54.5
Samples: 6
Max nTPM: 61.4
Min nTPM: 43.1
P10809_1016
43.1
P10809_1031
54.2
P10809_1050
58.5
P10809_1069
56.6
P10809_1087
53.4
P10809_1110
61.4
T-reg nTPM: 114.8
Samples: 6
Max nTPM: 147.7
Min nTPM: 82.2
P10809_1018
82.2
P10809_1037
116.6
P10809_1056
110.7
P10809_1075
117.3
P10809_1094
114.3
P10809_1106
147.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
150.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 119.2
Samples: 4
Max nTPM: 142.7
Min nTPM: 94.7
RHH5202_R3573
120.0
RHH5230_R3602
142.7
RHH5259_R3631
94.7
RHH5288_R3660
119.5
Effector memory CD8 T-cell nTPM: 131.8
Samples: 4
Max nTPM: 138.0
Min nTPM: 128.0
RHH5203_R3574
131.8
RHH5231_R3603
129.5
RHH5260_R3632
128.0
RHH5289_R3661
138.0
MAIT T-cell nTPM: 108.2
Samples: 4
Max nTPM: 116.2
Min nTPM: 94.5
RHH5233_R3605
113.4
RHH5205_R3576
94.5
RHH5262_R3634
116.2
RHH5297_R3663
108.5
Memory CD4 T-cell TFH nTPM: 124.1
Samples: 4
Max nTPM: 137.7
Min nTPM: 104.5
RHH5300_R3666
104.5
RHH5236_R3608
133.8
RHH5265_R3637
120.4
RHH5208_R3579
137.7
Memory CD4 T-cell Th1 nTPM: 112.9
Samples: 4
Max nTPM: 130.5
Min nTPM: 93.6
RHH5210_R3581
115.6
RHH5302_R3668
130.5
RHH5238_R3610
93.6
RHH5267_R3639
112.0
Memory CD4 T-cell Th1/Th17 nTPM: 129.2
Samples: 4
Max nTPM: 160.5
Min nTPM: 79.4
RHH5303_R3669
157.5
RHH5211_R3582
160.5
RHH5239_R3611
79.4
RHH5268_R3640
119.2
Memory CD4 T-cell Th17 nTPM: 142.1
Samples: 4
Max nTPM: 158.8
Min nTPM: 119.4
RHH5304_R3670
146.7
RHH5212_R3583
158.8
RHH5240_R3612
143.3
RHH5269_R3641
119.4
Memory CD4 T-cell Th2 nTPM: 150.3
Samples: 4
Max nTPM: 180.0
Min nTPM: 121.1
RHH5305_R3671
121.1
RHH5213_R3584
158.8
RHH5241_R3613
180.0
RHH5270_R3642
141.1
Naive CD4 T-cell nTPM: 108.3
Samples: 4
Max nTPM: 124.2
Min nTPM: 95.6
RHH5306_R3672
95.6
RHH5214_R3585
124.2
RHH5242_R3614
107.0
RHH5271_R3643
106.4
Naive CD8 T-cell nTPM: 104.1
Samples: 4
Max nTPM: 115.4
Min nTPM: 84.2
RHH5201_R3572
115.4
RHH5229_R3601
84.2
RHH5258_R3630
105.8
RHH5287_R3659
111.0
Non-Vd2 gdTCR nTPM: 124.1
Samples: 4
Max nTPM: 149.5
Min nTPM: 103.9
RHH5235_R3607
123.9
RHH5264_R3636
119.0
RHH5207_R3578
149.5
RHH5299_R3665
103.9
T-reg nTPM: 131.5
Samples: 4
Max nTPM: 143.5
Min nTPM: 123.2
RHH5301_R3667
131.3
RHH5237_R3609
123.2
RHH5266_R3638
143.5
RHH5209_R3580
127.9
Terminal effector memory CD4 T-cell nTPM: 112.0
Samples: 2
Max nTPM: 133.2
Min nTPM: 90.7
RHH5243_R3615
90.7
RHH5272_R3644
133.2
Terminal effector memory CD8 T-cell nTPM: 115.0
Samples: 4
Max nTPM: 130.9
Min nTPM: 101.0
RHH5232_R3604
121.5
RHH5204_R3575
130.9
RHH5261_R3633
101.0
RHH5296_R3662
106.6
Vd2 gdTCR nTPM: 111.4
Samples: 4
Max nTPM: 152.9
Min nTPM: 80.4
RHH5234_R3606
80.4
RHH5206_R3577
152.9
RHH5263_R3635
116.7
RHH5298_R3664
95.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
