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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
143.0
nTPM
Monaco:
501.7
nTPM
Schmiedel:
754.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.0
HPA sample
nTPM
gdT-cell nTPM: 8.2
Samples: 6
Max nTPM: 15.4
Min nTPM: 2.0
P10809_1007
2.0
P10809_1022
3.4
P10809_1041
8.9
P10809_1060
15.4
P10809_1077
13.7
P10809_1098
5.8
MAIT T-cell nTPM: 1.6
Samples: 6
Max nTPM: 2.9
Min nTPM: 0.8
P10809_1006
2.4
P10809_1024
0.8
P10809_1043
1.1
P10809_1062
0.9
P10809_1083
2.9
P10809_1097
1.6
Memory CD4 T-cell nTPM: 68.5
Samples: 6
Max nTPM: 94.8
Min nTPM: 42.8
P10809_1014
79.8
P10809_1026
88.5
P10809_1045
94.8
P10809_1064
44.0
P10809_1086
42.8
P10809_1113
61.1
Memory CD8 T-cell nTPM: 29.9
Samples: 5
Max nTPM: 57.9
Min nTPM: 12.3
P10809_1012
57.9
P10809_1027
17.4
P10809_1046
26.9
P10809_1065
12.3
P10809_1111
34.8
Naive CD4 T-cell nTPM: 143.1
Samples: 6
Max nTPM: 180.2
Min nTPM: 96.0
P10809_1015
131.5
P10809_1030
159.6
P10809_1049
156.3
P10809_1068
180.2
P10809_1085
96.0
P10809_1112
134.7
Naive CD8 T-cell nTPM: 102.6
Samples: 6
Max nTPM: 144.8
Min nTPM: 21.3
P10809_1016
144.8
P10809_1031
140.4
P10809_1050
98.8
P10809_1069
88.5
P10809_1087
21.3
P10809_1110
121.6
T-reg nTPM: 98.0
Samples: 6
Max nTPM: 126.9
Min nTPM: 84.2
P10809_1018
84.2
P10809_1037
93.4
P10809_1056
126.9
P10809_1075
84.8
P10809_1094
100.5
P10809_1106
97.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
501.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 236.2
Samples: 4
Max nTPM: 253.4
Min nTPM: 198.3
RHH5202_R3573
198.3
RHH5230_R3602
241.2
RHH5259_R3631
253.4
RHH5288_R3660
252.0
Effector memory CD8 T-cell nTPM: 40.9
Samples: 4
Max nTPM: 64.3
Min nTPM: 9.0
RHH5203_R3574
9.0
RHH5231_R3603
37.5
RHH5260_R3632
52.8
RHH5289_R3661
64.3
MAIT T-cell nTPM: 3.0
Samples: 4
Max nTPM: 6.2
Min nTPM: 0.0
RHH5233_R3605
5.4
RHH5205_R3576
0.3
RHH5262_R3634
6.2
RHH5297_R3663
0.0
Memory CD4 T-cell TFH nTPM: 257.8
Samples: 4
Max nTPM: 288.8
Min nTPM: 207.8
RHH5300_R3666
252.4
RHH5236_R3608
207.8
RHH5265_R3637
282.2
RHH5208_R3579
288.8
Memory CD4 T-cell Th1 nTPM: 261.4
Samples: 4
Max nTPM: 307.7
Min nTPM: 220.4
RHH5210_R3581
307.7
RHH5302_R3668
220.4
RHH5238_R3610
256.1
RHH5267_R3639
261.5
Memory CD4 T-cell Th1/Th17 nTPM: 162.1
Samples: 4
Max nTPM: 238.4
Min nTPM: 95.1
RHH5303_R3669
95.1
RHH5211_R3582
120.6
RHH5239_R3611
238.4
RHH5268_R3640
194.2
Memory CD4 T-cell Th17 nTPM: 157.2
Samples: 4
Max nTPM: 206.7
Min nTPM: 110.2
RHH5304_R3670
110.2
RHH5212_R3583
135.2
RHH5240_R3612
176.5
RHH5269_R3641
206.7
Memory CD4 T-cell Th2 nTPM: 249.7
Samples: 4
Max nTPM: 320.3
Min nTPM: 166.4
RHH5305_R3671
210.8
RHH5213_R3584
166.4
RHH5241_R3613
320.3
RHH5270_R3642
301.2
Naive CD4 T-cell nTPM: 464.6
Samples: 4
Max nTPM: 494.9
Min nTPM: 423.2
RHH5306_R3672
423.2
RHH5214_R3585
459.9
RHH5242_R3614
480.2
RHH5271_R3643
494.9
Naive CD8 T-cell nTPM: 501.7
Samples: 4
Max nTPM: 551.1
Min nTPM: 479.1
RHH5201_R3572
551.1
RHH5229_R3601
497.1
RHH5258_R3630
479.1
RHH5287_R3659
479.6
Non-Vd2 gdTCR nTPM: 71.3
Samples: 4
Max nTPM: 95.4
Min nTPM: 37.5
RHH5235_R3607
95.4
RHH5264_R3636
62.7
RHH5207_R3578
37.5
RHH5299_R3665
89.5
T-reg nTPM: 309.7
Samples: 4
Max nTPM: 370.8
Min nTPM: 271.3
RHH5301_R3667
272.9
RHH5237_R3609
271.3
RHH5266_R3638
370.8
RHH5209_R3580
323.7
Terminal effector memory CD4 T-cell nTPM: 83.9
Samples: 2
Max nTPM: 107.5
Min nTPM: 60.2
RHH5243_R3615
60.2
RHH5272_R3644
107.5
Terminal effector memory CD8 T-cell nTPM: 44.9
Samples: 4
Max nTPM: 76.0
Min nTPM: 13.6
RHH5232_R3604
39.8
RHH5204_R3575
13.6
RHH5261_R3633
76.0
RHH5296_R3662
50.1
Vd2 gdTCR nTPM: 43.8
Samples: 4
Max nTPM: 64.3
Min nTPM: 6.3
RHH5234_R3606
64.3
RHH5206_R3577
6.3
RHH5263_R3635
56.2
RHH5298_R3664
48.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
