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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
334.9
nTPM
FANTOM5:
395.9
Scaled Tags Per Million
Pig:
510.3
nTPM
Allen mouse:
16.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
334.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 178.7
2301
Female, age 85, both hemispheres
199.1
1984
Male, age 76, both hemispheres
191.7
2188
Female, age 91, both hemispheres
163.9
2090
Male, age 80, both hemispheres
160.0
Dorsal cochlear nucleus nTPM: 180.1
2058
Male, age 76, both hemispheres
195.4
2802
Male, age 74, right hemisphere
187.8
2187
Female, age 91, both hemispheres
185.7
2370
Male, age 61, both hemispheres
180.7
2378
Male, age 80, both hemispheres
151.1
Dorsal tegmental nucleus nTPM: 196.7
2083
Male, age 80, both hemispheres
241.7
1936
Male, age 76, left hemisphere
184.7
2326
Male, age 74, both hemispheres
181.0
2358
Male, age 61, both hemispheres
179.3
Dorsolateral tegmental area nTPM: 194.9
2654
Male, age 80, both hemispheres
225.3
2751
Female, age 85, both hemispheres
215.0
2141
Male, age 76, both hemispheres
212.0
2360
Male, age 74, both hemispheres
179.3
2337
Male, age 61, both hemispheres
142.9
Kolliker-Fuse nucleus nTPM: 219.5
2163
Male, age 80, both hemispheres
288.1
2315
Male, age 76, right hemisphere
187.3
2793
Female, age 91, left hemisphere
183.1
Lateral lemniscal nuclei nTPM: 260.9
2169
Male, age 76, both hemispheres
290.1
2036
Male, age 80, both hemispheres
282.8
2453
Male, age 74, right hemisphere
273.0
2746
Female, age 85, left hemisphere
266.5
2320
Female, age 91, left hemisphere
192.0
Lateral parabrachial nucleus nTPM: 218.8
2139
Female, age 85, right hemisphere
294.0
2013
Male, age 80, both hemispheres
214.1
2790
Male, age 61, both hemispheres
197.5
2792
Male, age 76, both hemispheres
169.8
Lateral vestibular nucleus nTPM: 230.0
2184
Male, age 76, both hemispheres
255.9
2311
Male, age 80, both hemispheres
204.1
Locus coeruleus nTPM: 297.7
2123
Female, age 91, both hemispheres
388.7
2014
Male, age 55, unknown
341.5
2788
Male, age 74, unknown
285.9
2162
Male, age 80, both hemispheres
285.3
2317
Female, age 72, unknown
277.0
2720
Male, age 74, both hemispheres
262.3
1980
Male, age 76, both hemispheres
243.0
Medial parabrachial nucleus nTPM: 214.7
2854
Male, age 80, both hemispheres
246.1
2170
Female, age 91, both hemispheres
222.8
2156
Male, age 61, both hemispheres
210.6
2463
Female, age 85, right hemisphere
203.0
2786
Male, age 76, both hemispheres
191.0
Medial periolivary nuclei nTPM: 249.5
2171
Female, age 85, both hemispheres
393.6
2063
Male, age 76, both hemispheres
296.4
2791
Male, age 74, right hemisphere
229.4
2081
Male, age 80, both hemispheres
179.9
2458
Female, age 91, both hemispheres
148.4
Motor facial nucleus nTPM: 255.4
2062
Male, age 76, both hemispheres
326.5
2327
Male, age 80, both hemispheres
272.1
2365
Male, age 74, right hemisphere
266.3
2697
Female, age 85, both hemispheres
260.9
2126
Male, age 61, both hemispheres
224.5
2795
Female, age 91, both hemispheres
182.1
Motor trigeminal nucleus nTPM: 215.5
2079
Male, age 80, both hemispheres
258.0
2335
Male, age 61, both hemispheres
223.0
2560
Male, age 74, both hemispheres
216.9
2309
Male, age 76, both hemispheres
216.0
2321
Female, age 91, both hemispheres
163.4
Nuclei of the trapezoid body nTPM: 306.7
2159
Male, age 61, both hemispheres
436.5
2735
Female, age 85, both hemispheres
405.0
1983
Male, age 76, both hemispheres
279.1
2166
Male, age 80, both hemispheres
246.8
2368
Female, age 91, both hemispheres
166.1
Nucleus raphe magnus nTPM: 334.9
2160
Male, age 61, both hemispheres
553.1
2172
Female, age 85, both hemispheres
434.7
2455
Male, age 74, both hemispheres
322.2
2328
Male, age 80, both hemispheres
267.2
2051
Male, age 76, both hemispheres
238.1
2459
Female, age 91, both hemispheres
194.1
Paramedian reticular nucleus nTPM: 282.5
2050
Female, age 85, both hemispheres
332.3
2057
Male, age 80, both hemispheres
290.0
2313
Male, age 61, both hemispheres
279.7
2052
Male, age 76, both hemispheres
228.0
Pedunculopontine tegmental nucleus nTPM: 210.2
1921
Female, age 85, both hemispheres
230.0
2334
Male, age 80, both hemispheres
223.1
2338
Male, age 61, both hemispheres
177.5
Pontine nuclei nTPM: 300.0
2727
Male, age 61, right hemisphere
478.9
2787
Female, age 85, both hemispheres
406.4
1863
Male, age 55, unknown
365.6
2109
Female, age 72, unknown
291.0
1968
Male, age 76, left hemisphere
276.1
2115
Male, age 80, left hemisphere
214.3
2454
Male, age 74, left hemisphere
208.0
2319
Female, age 91, both hemispheres
159.7
Pontine raphe nucleus nTPM: 281.9
2122
Female, age 85, midline
304.3
2853
Male, age 76, midline
259.5
Posteroventral cochlear nucleus nTPM: 185.9
2752
Female, age 85, both hemispheres
255.4
2070
Male, age 76, both hemispheres
251.2
2371
Male, age 61, both hemispheres
182.4
2341
Male, age 80, both hemispheres
134.3
2135
Female, age 91, both hemispheres
106.2
Principal sensory trigeminal nucleus nTPM: 314.2
2158
Male, age 61, both hemispheres
495.1
2008
Male, age 80, left hemisphere
373.9
2324
Male, age 76, both hemispheres
221.8
2367
Female, age 91, left hemisphere
165.9
Reticular pontine nucleus, caudal nTPM: 243.0
2332
Male, age 80, right hemisphere
322.6
2092
Male, age 76, both hemispheres
248.5
2559
Male, age 74, both hemispheres
203.9
2457
Female, age 91, both hemispheres
197.2
Reticular pontine nucleus, oral nTPM: 232.3
2012
Female, age 85, both hemispheres
279.0
2361
Male, age 74, both hemispheres
261.2
1939
Male, age 80, both hemispheres
236.6
2167
Male, age 76, both hemispheres
216.1
2366
Female, age 91, both hemispheres
168.6
Reticulotegmental nucleus nTPM: 218.6
2325
Male, age 76, both hemispheres
242.1
2452
Male, age 74, both hemispheres
222.3
2333
Male, age 80, both hemispheres
208.0
2322
Female, age 91, both hemispheres
202.1
Spinal trigeminal nucleus, oral nTPM: 244.8
2164
Male, age 80, both hemispheres
293.2
2737
Female, age 85, both hemispheres
244.6
1978
Male, age 76, both hemispheres
196.7
Subcoeruleus area nTPM: 225.3
2323
Female, age 91, left hemisphere
280.8
1958
Male, age 80, both hemispheres
270.7
2089
Male, age 76, left hemisphere
200.4
2451
Male, age 74, both hemispheres
191.9
2369
Female, age 85, left hemisphere
182.7
Superior olive nTPM: 261.5
1875
Female, age 85, both hemispheres
360.7
2329
Male, age 80, right hemisphere
252.4
2561
Female, age 91, both hemispheres
234.1
2020
Male, age 76, both hemispheres
231.5
2364
Male, age 74, right hemisphere
228.8
Ventral periolivary nuclei nTPM: 278.9
2130
Female, age 85, both hemispheres
337.3
2165
Male, age 80, both hemispheres
330.5
2023
Male, age 76, both hemispheres
227.7
2794
Female, age 91, left hemisphere
219.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 225.2
2449
Male, age 74, both hemispheres
289.6
2840
Female, age 85, both hemispheres
264.1
2161
Male, age 80, both hemispheres
231.1
1959
Male, age 76, both hemispheres
220.7
2359
Male, age 61, both hemispheres
217.0
2456
Female, age 91, both hemispheres
128.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
510.3
Pig sample
Sample description
nTPM
Pons nTPM: 510.3
Samples: 4
Max nTPM: 623.6
Min nTPM: 390.4
Sample A
Female
522.9
Sample B
Female
390.4
Sample C
Male
504.4
Sample D
Male
623.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
