HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:28.5 nTPM
HPA Brain:95.7 nTPM
GTEx:28.5 nTPM
FANTOM5:58.6 Scaled Tags Per Million
Pig:86.4 nTPM
Mouse:65.0 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058432Antibody CAB022079
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 95.7
Sample id Sample description nTPM
Hippocampus
nTPM: 72.6
1898 Male, age 80, left hemisphere 93.4
2529 Female, age 94, left hemisphere 72.2
1855 Male, age 76, left hemisphere 69.9
2148 Female, age 91, left hemisphere 69.9
2621 Female, age 67, right hemisphere 66.5
1911 Female, age 85, right hemisphere 63.8
Dentate gyrus
nTPM: 68.9
1927 Female, age 91, both hemispheres 93.9
2528 Male, age 74, both hemispheres 72.8
2246 Female, age 85, both hemispheres 70.0
2010 Male, age 76, both hemispheres 68.6
2530 Female, age 94, left hemisphere 55.9
2531 Female, age 67, both hemispheres 52.2
Entorhinal gyrus
nTPM: 76.1
1938 Female, age 85, left hemisphere 85.3
2764 Male, age 80, right hemisphere 85.0
2686 Male, age 75, right hemisphere 75.8
1787 Male, age 76, left hemisphere 74.5
2117 Female, age 91, right hemisphere 68.4
2613 Female, age 94, left hemisphere 67.7
Hippocampus, CA1
nTPM: 78.4
2749 Male, age 80, left hemisphere 103.6
2527 Male, age 74, both hemispheres 84.6
1873 Female, age 85, both hemispheres 77.7
2082 Female, age 91, right hemisphere 63.9
2045 Male, age 76, both hemispheres 62.4
Hippocampus, CA2
nTPM: 75.3
1892 Male, age 76, both hemispheres 103.3
1963 Male, age 80, left hemisphere 79.5
2249 Male, age 74, both hemispheres 77.5
2437 Female, age 94, left hemisphere 63.9
1940 Female, age 85, left hemisphere 63.8
2113 Female, age 91, right hemisphere 63.7
Hippocampus, CA3
nTPM: 75.4
2137 Male, age 80, left hemisphere 100.0
1867 Male, age 76, both hemispheres 93.8
1891 Female, age 85, both hemispheres 72.2
2436 Male, age 74, both hemispheres 68.6
2620 Female, age 94, left hemisphere 65.4
2861 Female, age 67, both hemispheres 52.1
Parahippocampal cortex
nTPM: 80.1
1850 Male, age 80, both hemispheres 112.6
1990 Female, age 91, right hemisphere 87.2
2693 Female, age 94, both hemispheres 84.4
1933 Female, age 85, both hemispheres 84.2
2692 Male, age 74, both hemispheres 80.0
2245 Female, age 91, both hemispheres 74.3
2532 Female, age 72, left hemisphere 72.9
2250 Female, age 67, right hemisphere 71.3
2622 Female, age 67, right hemisphere 67.6
2018 Male, age 76, both hemispheres 66.8
Perirhinal gyrus
nTPM: 95.7
1847 Female, age 91, left hemisphere 111.4
1794 Male, age 80, right hemisphere 104.0
1841 Female, age 85, right hemisphere 98.4
2521 Female, age 94, right hemisphere 86.1
2848 Male, age 76, right hemisphere 78.5
Subiculum
nTPM: 73.5
1901 Male, age 80, both hemispheres 89.6
1977 Female, age 85, both hemispheres 77.4
2438 Female, age 94, left hemisphere 76.1
2619 Male, age 74, both hemispheres 72.5
2042 Male, age 76, both hemispheres 62.8
2729 Female, age 91, right hemisphere 62.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.5
Samples: 197

Max nTPM: 60.6
Min nTPM: 11.2
Std nTPM: 8.3
Median nTPM: 26.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 60.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 58.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 55.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 49.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 46.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 46.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 43.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 43.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 43.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.6
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 48.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.4
Pig sample Sample description nTPM
Subiculum
nTPM: 86.4
Samples: 4

Max nTPM: 103.5
Min nTPM: 76.2
Sample A Female 103.5
Sample B Female 76.2
Sample C Male 85.2
Sample D Male 80.7
Dorsal hippocampus
nTPM: 78.7
Samples: 4

Max nTPM: 86.3
Min nTPM: 65.0
Sample A Female 85.7
Sample B Female 77.8
Sample C Male 86.3
Sample D Male 65.0
Entorhinal cortex
nTPM: 73.9
Samples: 4

Max nTPM: 75.1
Min nTPM: 73.0
Sample A Female 73.0
Sample B Female 75.1
Sample C Male 73.4
Sample D Male 73.9
Ventral hippocampus
nTPM: 77.9
Samples: 4

Max nTPM: 98.8
Min nTPM: 70.9
Sample A Female 98.8
Sample B Female 71.0
Sample C Male 70.9
Sample D Male 70.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.0
Samples: 4

Max nTPM: 76.7
Min nTPM: 58.4
Sample A Male 63.4
Sample B Male 61.5
Sample C Female 58.4
Sample D Female 76.7
Hippocampal formation
nTPM: 59.6
Samples: 4

Max nTPM: 70.1
Min nTPM: 52.7
Sample A Male 53.1
Sample B Male 70.1
Sample C Female 62.5
Sample D Female 52.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
70919991 Antisense, RP_050713_02_E03, Mouse strain C57BL/6J (56 days, male) 4.2

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