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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
82.9
nTPM
Monaco:
42.8
nTPM
Schmiedel:
39.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.9
HPA sample
nTPM
gdT-cell nTPM: 35.5
Samples: 6
Max nTPM: 39.0
Min nTPM: 28.8
P10809_1007
39.0
P10809_1022
34.3
P10809_1041
36.0
P10809_1060
28.8
P10809_1077
36.8
P10809_1098
38.2
MAIT T-cell nTPM: 45.1
Samples: 6
Max nTPM: 57.1
Min nTPM: 36.1
P10809_1006
45.6
P10809_1024
47.5
P10809_1043
37.4
P10809_1062
36.1
P10809_1083
46.8
P10809_1097
57.1
Memory CD4 T-cell nTPM: 47.9
Samples: 6
Max nTPM: 59.1
Min nTPM: 38.5
P10809_1014
58.1
P10809_1026
59.1
P10809_1045
38.5
P10809_1064
44.9
P10809_1086
45.4
P10809_1113
41.3
Memory CD8 T-cell nTPM: 43.8
Samples: 5
Max nTPM: 50.1
Min nTPM: 33.7
P10809_1012
48.9
P10809_1027
44.6
P10809_1046
33.7
P10809_1065
41.5
P10809_1111
50.1
Naive CD4 T-cell nTPM: 40.0
Samples: 6
Max nTPM: 47.1
Min nTPM: 32.2
P10809_1015
47.1
P10809_1030
35.9
P10809_1049
34.1
P10809_1068
43.6
P10809_1085
46.9
P10809_1112
32.2
Naive CD8 T-cell nTPM: 47.0
Samples: 6
Max nTPM: 54.8
Min nTPM: 33.9
P10809_1016
51.8
P10809_1031
54.8
P10809_1050
40.9
P10809_1069
48.6
P10809_1087
51.7
P10809_1110
33.9
T-reg nTPM: 83.0
Samples: 6
Max nTPM: 93.6
Min nTPM: 64.6
P10809_1018
90.6
P10809_1037
93.6
P10809_1056
64.6
P10809_1075
77.2
P10809_1094
92.1
P10809_1106
79.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.0
Samples: 4
Max nTPM: 55.5
Min nTPM: 22.5
RHH5202_R3573
32.7
RHH5230_R3602
22.5
RHH5259_R3631
25.1
RHH5288_R3660
55.5
Effector memory CD8 T-cell nTPM: 28.6
Samples: 4
Max nTPM: 41.4
Min nTPM: 20.5
RHH5203_R3574
31.3
RHH5231_R3603
41.4
RHH5260_R3632
21.3
RHH5289_R3661
20.5
MAIT T-cell nTPM: 27.7
Samples: 4
Max nTPM: 34.9
Min nTPM: 18.2
RHH5233_R3605
27.8
RHH5205_R3576
18.2
RHH5262_R3634
29.8
RHH5297_R3663
34.9
Memory CD4 T-cell TFH nTPM: 27.5
Samples: 4
Max nTPM: 43.6
Min nTPM: 16.4
RHH5300_R3666
23.2
RHH5236_R3608
43.6
RHH5265_R3637
16.4
RHH5208_R3579
26.6
Memory CD4 T-cell Th1 nTPM: 28.3
Samples: 4
Max nTPM: 43.7
Min nTPM: 15.2
RHH5210_R3581
31.8
RHH5302_R3668
43.7
RHH5238_R3610
22.4
RHH5267_R3639
15.2
Memory CD4 T-cell Th1/Th17 nTPM: 32.8
Samples: 4
Max nTPM: 51.6
Min nTPM: 15.1
RHH5303_R3669
31.9
RHH5211_R3582
51.6
RHH5239_R3611
15.1
RHH5268_R3640
32.7
Memory CD4 T-cell Th17 nTPM: 30.0
Samples: 4
Max nTPM: 42.4
Min nTPM: 19.2
RHH5304_R3670
25.5
RHH5212_R3583
42.4
RHH5240_R3612
32.8
RHH5269_R3641
19.2
Memory CD4 T-cell Th2 nTPM: 36.6
Samples: 4
Max nTPM: 40.8
Min nTPM: 29.6
RHH5305_R3671
40.8
RHH5213_R3584
38.1
RHH5241_R3613
37.7
RHH5270_R3642
29.6
Naive CD4 T-cell nTPM: 23.8
Samples: 4
Max nTPM: 28.7
Min nTPM: 17.3
RHH5306_R3672
20.4
RHH5214_R3585
28.6
RHH5242_R3614
28.7
RHH5271_R3643
17.3
Naive CD8 T-cell nTPM: 23.9
Samples: 4
Max nTPM: 38.8
Min nTPM: 17.2
RHH5201_R3572
21.7
RHH5229_R3601
17.9
RHH5258_R3630
38.8
RHH5287_R3659
17.2
Non-Vd2 gdTCR nTPM: 30.8
Samples: 4
Max nTPM: 40.7
Min nTPM: 22.8
RHH5235_R3607
22.8
RHH5264_R3636
40.7
RHH5207_R3578
27.1
RHH5299_R3665
32.7
T-reg nTPM: 33.7
Samples: 4
Max nTPM: 43.4
Min nTPM: 19.9
RHH5301_R3667
39.3
RHH5237_R3609
43.4
RHH5266_R3638
19.9
RHH5209_R3580
32.1
Terminal effector memory CD4 T-cell nTPM: 27.7
Samples: 2
Max nTPM: 38.3
Min nTPM: 17.1
RHH5243_R3615
17.1
RHH5272_R3644
38.3
Terminal effector memory CD8 T-cell nTPM: 37.3
Samples: 4
Max nTPM: 44.9
Min nTPM: 29.9
RHH5232_R3604
34.2
RHH5204_R3575
44.9
RHH5261_R3633
29.9
RHH5296_R3662
40.0
Vd2 gdTCR nTPM: 42.9
Samples: 4
Max nTPM: 57.4
Min nTPM: 24.5
RHH5234_R3606
42.8
RHH5206_R3577
57.4
RHH5263_R3635
24.5
RHH5298_R3664
46.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
