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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
90.1
nTPM
Monaco:
113.5
nTPM
Schmiedel:
70.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.1
HPA sample
nTPM
gdT-cell nTPM: 90.1
Samples: 6
Max nTPM: 164.4
Min nTPM: 43.2
P10809_1007
43.2
P10809_1022
100.1
P10809_1041
164.4
P10809_1060
60.9
P10809_1077
106.0
P10809_1098
65.8
MAIT T-cell nTPM: 56.8
Samples: 6
Max nTPM: 89.1
Min nTPM: 33.3
P10809_1006
33.3
P10809_1024
63.0
P10809_1043
89.1
P10809_1062
56.3
P10809_1083
57.2
P10809_1097
41.9
Memory CD4 T-cell nTPM: 45.9
Samples: 6
Max nTPM: 90.6
Min nTPM: 20.9
P10809_1014
20.9
P10809_1026
35.4
P10809_1045
47.9
P10809_1064
46.8
P10809_1086
90.6
P10809_1113
33.6
Memory CD8 T-cell nTPM: 57.5
Samples: 5
Max nTPM: 98.1
Min nTPM: 31.1
P10809_1012
31.1
P10809_1027
62.7
P10809_1046
98.1
P10809_1065
53.6
P10809_1111
42.1
Naive CD4 T-cell nTPM: 29.0
Samples: 6
Max nTPM: 53.4
Min nTPM: 12.8
P10809_1015
12.8
P10809_1030
29.2
P10809_1049
39.3
P10809_1068
18.8
P10809_1085
53.4
P10809_1112
20.5
Naive CD8 T-cell nTPM: 52.6
Samples: 6
Max nTPM: 106.3
Min nTPM: 14.0
P10809_1016
14.0
P10809_1031
37.2
P10809_1050
61.9
P10809_1069
72.0
P10809_1087
106.3
P10809_1110
24.3
T-reg nTPM: 33.8
Samples: 6
Max nTPM: 71.5
Min nTPM: 15.2
P10809_1018
15.2
P10809_1037
24.1
P10809_1056
49.6
P10809_1075
23.8
P10809_1094
71.5
P10809_1106
18.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 46.0
Samples: 4
Max nTPM: 79.0
Min nTPM: 30.0
RHH5202_R3573
32.1
RHH5230_R3602
42.9
RHH5259_R3631
30.0
RHH5288_R3660
79.0
Effector memory CD8 T-cell nTPM: 82.7
Samples: 4
Max nTPM: 140.6
Min nTPM: 59.7
RHH5203_R3574
61.6
RHH5231_R3603
59.7
RHH5260_R3632
69.0
RHH5289_R3661
140.6
MAIT T-cell nTPM: 91.3
Samples: 4
Max nTPM: 110.0
Min nTPM: 69.3
RHH5233_R3605
69.3
RHH5205_R3576
89.0
RHH5262_R3634
96.9
RHH5297_R3663
110.0
Memory CD4 T-cell TFH nTPM: 48.2
Samples: 4
Max nTPM: 64.2
Min nTPM: 35.2
RHH5300_R3666
64.2
RHH5236_R3608
42.6
RHH5265_R3637
35.2
RHH5208_R3579
50.8
Memory CD4 T-cell Th1 nTPM: 45.4
Samples: 4
Max nTPM: 64.0
Min nTPM: 30.1
RHH5210_R3581
41.3
RHH5302_R3668
64.0
RHH5238_R3610
30.1
RHH5267_R3639
46.3
Memory CD4 T-cell Th1/Th17 nTPM: 69.4
Samples: 4
Max nTPM: 100.3
Min nTPM: 37.0
RHH5303_R3669
100.3
RHH5211_R3582
79.4
RHH5239_R3611
37.0
RHH5268_R3640
60.9
Memory CD4 T-cell Th17 nTPM: 67.1
Samples: 4
Max nTPM: 81.9
Min nTPM: 49.5
RHH5304_R3670
81.9
RHH5212_R3583
79.7
RHH5240_R3612
57.4
RHH5269_R3641
49.5
Memory CD4 T-cell Th2 nTPM: 69.3
Samples: 4
Max nTPM: 94.1
Min nTPM: 44.6
RHH5305_R3671
94.1
RHH5213_R3584
75.4
RHH5241_R3613
44.6
RHH5270_R3642
62.9
Naive CD4 T-cell nTPM: 45.2
Samples: 4
Max nTPM: 56.1
Min nTPM: 39.4
RHH5306_R3672
39.4
RHH5214_R3585
45.4
RHH5242_R3614
39.9
RHH5271_R3643
56.1
Naive CD8 T-cell nTPM: 36.7
Samples: 4
Max nTPM: 39.5
Min nTPM: 32.9
RHH5201_R3572
32.9
RHH5229_R3601
36.6
RHH5258_R3630
39.5
RHH5287_R3659
37.8
Non-Vd2 gdTCR nTPM: 113.5
Samples: 4
Max nTPM: 156.2
Min nTPM: 80.5
RHH5235_R3607
87.5
RHH5264_R3636
129.7
RHH5207_R3578
80.5
RHH5299_R3665
156.2
T-reg nTPM: 45.5
Samples: 4
Max nTPM: 67.2
Min nTPM: 24.7
RHH5301_R3667
67.2
RHH5237_R3609
63.4
RHH5266_R3638
24.7
RHH5209_R3580
26.5
Terminal effector memory CD4 T-cell nTPM: 75.6
Samples: 2
Max nTPM: 79.2
Min nTPM: 71.9
RHH5243_R3615
71.9
RHH5272_R3644
79.2
Terminal effector memory CD8 T-cell nTPM: 100.1
Samples: 4
Max nTPM: 141.0
Min nTPM: 72.7
RHH5232_R3604
90.8
RHH5204_R3575
72.7
RHH5261_R3633
95.7
RHH5296_R3662
141.0
Vd2 gdTCR nTPM: 101.4
Samples: 4
Max nTPM: 120.8
Min nTPM: 84.5
RHH5234_R3606
84.5
RHH5206_R3577
95.9
RHH5263_R3635
104.5
RHH5298_R3664
120.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
