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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:106.6 nTPM
FANTOM5:203.3 Scaled Tags Per Million
Pig:179.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010631
Glial cells Not detected
Neuronal cells Not detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 106.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 106.6
Samples: 246

Max nTPM: 228.5
Min nTPM: 8.3
Std nTPM: 48.6
Median nTPM: 108.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 228.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 218.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 208.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 207.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 202.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 200.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 195.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 191.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 188.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 187.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 184.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 182.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 182.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 181.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 180.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 176.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 176.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 174.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 174.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 173.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 170.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 168.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 167.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 167.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 165.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 163.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 163.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 162.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 161.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 161.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 160.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 160.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 160.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 159.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 157.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 157.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 156.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 155.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 155.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 155.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 154.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 154.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 154.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 154.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 154.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 153.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 152.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 152.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 151.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 151.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 150.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 150.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 150.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 148.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 148.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 147.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 146.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 146.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 146.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 144.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 144.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 144.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 144.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 143.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 143.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 142.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 142.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 141.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 141.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 139.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 139.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 138.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 138.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 138.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 137.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 137.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 134.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 134.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 133.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 133.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 133.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 132.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 132.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 132.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 132.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 131.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 130.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 130.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 129.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 129.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 128.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 126.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 125.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 124.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 124.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 124.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 123.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 122.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 122.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 121.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 119.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 119.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 119.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 118.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 118.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 118.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 117.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 117.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 116.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 116.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 115.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 115.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 115.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 111.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 111.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 110.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 110.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 110.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 109.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 109.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 109.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 108.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 108.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 107.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 107.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 107.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 106.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 106.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 106.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 106.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 105.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 104.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 104.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 103.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 103.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 102.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 102.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 102.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 101.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 101.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 100.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 99.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 98.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 98.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 97.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 96.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 96.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 95.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 95.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 95.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 95.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 94.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 92.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 91.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 90.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 90.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 89.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 89.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 88.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 88.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 88.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 88.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 87.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 86.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 86.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 84.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 84.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 84.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 81.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 80.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 80.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 79.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 78.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 74.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 71.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 70.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 64.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 64.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 64.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 64.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 63.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 63.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 62.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 61.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 61.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 60.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 58.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 57.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 57.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 55.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 55.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 55.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 53.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 51.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 51.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 51.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 50.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 48.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 46.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 46.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 46.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 46.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 42.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 42.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 42.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 41.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 40.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 40.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 38.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 37.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 36.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 35.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 34.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 33.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 33.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 33.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 31.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 30.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 30.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 29.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 28.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 27.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 25.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 24.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 24.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 23.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 23.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 19.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 18.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 16.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 8.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 203.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 203.3
FF:10164-103B2 76 years, female 203.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 179.3
Pig sample Sample description nTPM
Caudate
nTPM: 179.4
Samples: 4

Max nTPM: 218.2
Min nTPM: 136.1
Sample A Female 136.1
Sample B Female 193.7
Sample C Male 218.2
Sample D Male 169.4

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