HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.0 nTPM
HPA Brain:14.7 nTPM
GTEx:15.0 nTPM
FANTOM5:13.6 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:10.3 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
2621 Female, age 67, right hemisphere 15.2
1855 Male, age 76, left hemisphere 15.0
2148 Female, age 91, left hemisphere 14.7
1898 Male, age 80, left hemisphere 14.6
2529 Female, age 94, left hemisphere 14.4
1911 Female, age 85, right hemisphere 12.2
Dentate gyrus
nTPM: 14.1
2530 Female, age 94, left hemisphere 16.8
1927 Female, age 91, both hemispheres 15.2
2010 Male, age 76, both hemispheres 14.5
2531 Female, age 67, both hemispheres 13.6
2246 Female, age 85, both hemispheres 12.7
2528 Male, age 74, both hemispheres 11.8
Entorhinal gyrus
nTPM: 14.7
2613 Female, age 94, left hemisphere 16.4
2686 Male, age 75, right hemisphere 15.5
1787 Male, age 76, left hemisphere 15.3
2764 Male, age 80, right hemisphere 15.1
2117 Female, age 91, right hemisphere 13.4
1938 Female, age 85, left hemisphere 12.7
Hippocampus, CA1
nTPM: 13.7
2749 Male, age 80, left hemisphere 16.3
2045 Male, age 76, both hemispheres 14.3
1873 Female, age 85, both hemispheres 13.8
2527 Male, age 74, both hemispheres 13.1
2082 Female, age 91, right hemisphere 11.0
Hippocampus, CA2
nTPM: 13.7
1892 Male, age 76, both hemispheres 15.5
1963 Male, age 80, left hemisphere 15.2
2437 Female, age 94, left hemisphere 14.8
2113 Female, age 91, right hemisphere 12.5
2249 Male, age 74, both hemispheres 12.0
1940 Female, age 85, left hemisphere 11.9
Hippocampus, CA3
nTPM: 13.8
2861 Female, age 67, both hemispheres 18.3
2620 Female, age 94, left hemisphere 15.2
1891 Female, age 85, both hemispheres 13.2
1867 Male, age 76, both hemispheres 13.1
2436 Male, age 74, both hemispheres 12.2
2137 Male, age 80, left hemisphere 10.8
Parahippocampal cortex
nTPM: 13.4
2622 Female, age 67, right hemisphere 16.4
2245 Female, age 91, both hemispheres 14.3
1933 Female, age 85, both hemispheres 13.8
2250 Female, age 67, right hemisphere 13.7
2532 Female, age 72, left hemisphere 13.6
1990 Female, age 91, right hemisphere 13.4
2693 Female, age 94, both hemispheres 13.2
1850 Male, age 80, both hemispheres 12.5
2018 Male, age 76, both hemispheres 12.0
2692 Male, age 74, both hemispheres 11.3
Perirhinal gyrus
nTPM: 13.9
1847 Female, age 91, left hemisphere 14.7
1794 Male, age 80, right hemisphere 14.2
2521 Female, age 94, right hemisphere 13.6
2848 Male, age 76, right hemisphere 13.5
1841 Female, age 85, right hemisphere 13.3
Subiculum
nTPM: 12.7
1977 Female, age 85, both hemispheres 14.4
2729 Female, age 91, right hemisphere 13.9
2438 Female, age 94, left hemisphere 13.3
2619 Male, age 74, both hemispheres 12.6
1901 Male, age 80, both hemispheres 11.4
2042 Male, age 76, both hemispheres 10.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 23.7
Min nTPM: 5.9
Std nTPM: 3.6
Median nTPM: 14.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 23.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 23.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 22.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 22.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 22.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 21.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 21.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 21.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.6
FF:10153-102I9 76 years, female 15.9
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.5
Pig sample Sample description nTPM
Subiculum
nTPM: 7.3
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.4
Sample A Female 9.3
Sample B Female 6.4
Sample C Male 7.1
Sample D Male 6.4
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.0
Sample A Female 8.5
Sample B Female 7.5
Sample C Male 6.8
Sample D Male 6.0
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.8
Sample A Female 7.7
Sample B Female 6.9
Sample C Male 8.6
Sample D Male 6.8
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.5
Sample A Female 5.9
Sample B Female 5.5
Sample C Male 8.7
Sample D Male 7.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.7
Sample A Male 10.3
Sample B Male 9.5
Sample C Female 8.7
Sample D Female 12.0
Hippocampal formation
nTPM: 10.4
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 11.3
Sample C Female 10.1
Sample D Female 10.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69528136 Antisense, RP_050421_03_B10, Mouse strain C57BL/6J (56 days, male) 0.2

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