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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
115.3
nTPM
Monaco:
248.3
nTPM
Schmiedel:
90.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.3
HPA sample
nTPM
gdT-cell nTPM: 115.3
Samples: 6
Max nTPM: 174.7
Min nTPM: 90.4
P10809_1007
99.2
P10809_1022
115.8
P10809_1041
174.7
P10809_1060
90.4
P10809_1077
111.8
P10809_1098
100.1
MAIT T-cell nTPM: 77.4
Samples: 6
Max nTPM: 90.8
Min nTPM: 64.1
P10809_1006
74.8
P10809_1024
90.8
P10809_1043
89.2
P10809_1062
64.1
P10809_1083
70.8
P10809_1097
74.5
Memory CD4 T-cell nTPM: 80.8
Samples: 6
Max nTPM: 104.0
Min nTPM: 63.3
P10809_1014
63.3
P10809_1026
70.1
P10809_1045
104.0
P10809_1064
87.9
P10809_1086
84.7
P10809_1113
74.8
Memory CD8 T-cell nTPM: 90.7
Samples: 5
Max nTPM: 121.6
Min nTPM: 64.8
P10809_1012
83.7
P10809_1027
82.2
P10809_1046
121.6
P10809_1065
101.1
P10809_1111
64.8
Naive CD4 T-cell nTPM: 24.4
Samples: 6
Max nTPM: 36.5
Min nTPM: 14.0
P10809_1015
18.1
P10809_1030
23.6
P10809_1049
35.5
P10809_1068
18.4
P10809_1085
36.5
P10809_1112
14.0
Naive CD8 T-cell nTPM: 50.6
Samples: 6
Max nTPM: 81.8
Min nTPM: 16.5
P10809_1016
16.5
P10809_1031
43.9
P10809_1050
53.0
P10809_1069
81.8
P10809_1087
80.4
P10809_1110
27.9
T-reg nTPM: 91.5
Samples: 6
Max nTPM: 107.7
Min nTPM: 83.5
P10809_1018
91.6
P10809_1037
87.1
P10809_1056
83.5
P10809_1075
86.9
P10809_1094
107.7
P10809_1106
92.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
248.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 159.7
Samples: 4
Max nTPM: 175.1
Min nTPM: 142.0
RHH5202_R3573
175.1
RHH5230_R3602
142.0
RHH5259_R3631
151.9
RHH5288_R3660
169.9
Effector memory CD8 T-cell nTPM: 219.9
Samples: 4
Max nTPM: 241.2
Min nTPM: 184.5
RHH5203_R3574
184.5
RHH5231_R3603
241.2
RHH5260_R3632
216.9
RHH5289_R3661
237.1
MAIT T-cell nTPM: 135.2
Samples: 4
Max nTPM: 144.4
Min nTPM: 127.8
RHH5233_R3605
144.4
RHH5205_R3576
127.8
RHH5262_R3634
133.3
RHH5297_R3663
135.4
Memory CD4 T-cell TFH nTPM: 130.3
Samples: 4
Max nTPM: 155.9
Min nTPM: 97.3
RHH5300_R3666
97.3
RHH5236_R3608
150.3
RHH5265_R3637
155.9
RHH5208_R3579
117.8
Memory CD4 T-cell Th1 nTPM: 145.3
Samples: 4
Max nTPM: 178.8
Min nTPM: 108.8
RHH5210_R3581
108.8
RHH5302_R3668
165.1
RHH5238_R3610
128.6
RHH5267_R3639
178.8
Memory CD4 T-cell Th1/Th17 nTPM: 177.0
Samples: 4
Max nTPM: 191.0
Min nTPM: 155.4
RHH5303_R3669
183.2
RHH5211_R3582
178.4
RHH5239_R3611
155.4
RHH5268_R3640
191.0
Memory CD4 T-cell Th17 nTPM: 188.5
Samples: 4
Max nTPM: 241.0
Min nTPM: 139.5
RHH5304_R3670
139.5
RHH5212_R3583
203.9
RHH5240_R3612
241.0
RHH5269_R3641
169.6
Memory CD4 T-cell Th2 nTPM: 248.3
Samples: 4
Max nTPM: 341.7
Min nTPM: 203.9
RHH5305_R3671
203.9
RHH5213_R3584
224.1
RHH5241_R3613
341.7
RHH5270_R3642
223.4
Naive CD4 T-cell nTPM: 57.7
Samples: 4
Max nTPM: 65.9
Min nTPM: 49.4
RHH5306_R3672
56.4
RHH5214_R3585
49.4
RHH5242_R3614
65.9
RHH5271_R3643
59.1
Naive CD8 T-cell nTPM: 47.3
Samples: 4
Max nTPM: 66.9
Min nTPM: 26.3
RHH5201_R3572
60.0
RHH5229_R3601
35.8
RHH5258_R3630
66.9
RHH5287_R3659
26.3
Non-Vd2 gdTCR nTPM: 190.3
Samples: 4
Max nTPM: 202.6
Min nTPM: 169.8
RHH5235_R3607
169.8
RHH5264_R3636
202.6
RHH5207_R3578
202.4
RHH5299_R3665
186.3
T-reg nTPM: 122.2
Samples: 4
Max nTPM: 174.9
Min nTPM: 94.2
RHH5301_R3667
94.2
RHH5237_R3609
174.9
RHH5266_R3638
125.3
RHH5209_R3580
94.2
Terminal effector memory CD4 T-cell nTPM: 176.0
Samples: 2
Max nTPM: 213.5
Min nTPM: 138.5
RHH5243_R3615
138.5
RHH5272_R3644
213.5
Terminal effector memory CD8 T-cell nTPM: 196.3
Samples: 4
Max nTPM: 223.5
Min nTPM: 179.2
RHH5232_R3604
203.3
RHH5204_R3575
179.2
RHH5261_R3633
223.5
RHH5296_R3662
179.3
Vd2 gdTCR nTPM: 213.6
Samples: 4
Max nTPM: 223.8
Min nTPM: 207.6
RHH5234_R3606
207.6
RHH5206_R3577
212.0
RHH5263_R3635
223.8
RHH5298_R3664
211.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
