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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
178.4
nTPM
Monaco:
41.7
nTPM
Schmiedel:
84.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.4
HPA sample
nTPM
gdT-cell nTPM: 114.7
Samples: 6
Max nTPM: 140.2
Min nTPM: 86.5
P10809_1007
125.5
P10809_1022
86.5
P10809_1041
133.7
P10809_1060
99.7
P10809_1077
140.2
P10809_1098
102.3
MAIT T-cell nTPM: 162.8
Samples: 6
Max nTPM: 180.5
Min nTPM: 132.0
P10809_1006
132.0
P10809_1024
156.1
P10809_1043
164.8
P10809_1062
166.9
P10809_1083
176.2
P10809_1097
180.5
Memory CD4 T-cell nTPM: 167.1
Samples: 6
Max nTPM: 187.1
Min nTPM: 146.0
P10809_1014
178.2
P10809_1026
187.1
P10809_1045
146.0
P10809_1064
160.2
P10809_1086
181.1
P10809_1113
149.8
Memory CD8 T-cell nTPM: 143.4
Samples: 5
Max nTPM: 161.7
Min nTPM: 125.7
P10809_1012
136.2
P10809_1027
161.7
P10809_1046
125.7
P10809_1065
145.9
P10809_1111
147.3
Naive CD4 T-cell nTPM: 178.4
Samples: 6
Max nTPM: 203.8
Min nTPM: 145.1
P10809_1015
193.8
P10809_1030
203.8
P10809_1049
180.2
P10809_1068
176.1
P10809_1085
171.1
P10809_1112
145.1
Naive CD8 T-cell nTPM: 162.7
Samples: 6
Max nTPM: 236.6
Min nTPM: 132.3
P10809_1016
236.6
P10809_1031
145.4
P10809_1050
145.4
P10809_1069
162.3
P10809_1087
153.9
P10809_1110
132.3
T-reg nTPM: 151.7
Samples: 6
Max nTPM: 175.3
Min nTPM: 133.4
P10809_1018
152.0
P10809_1037
154.8
P10809_1056
175.3
P10809_1075
138.4
P10809_1094
156.0
P10809_1106
133.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 25.1
Samples: 4
Max nTPM: 43.5
Min nTPM: 12.6
RHH5202_R3573
12.6
RHH5230_R3602
43.5
RHH5259_R3631
24.9
RHH5288_R3660
19.2
Effector memory CD8 T-cell nTPM: 23.8
Samples: 4
Max nTPM: 32.7
Min nTPM: 15.2
RHH5203_R3574
29.2
RHH5231_R3603
15.2
RHH5260_R3632
32.7
RHH5289_R3661
18.2
MAIT T-cell nTPM: 32.3
Samples: 4
Max nTPM: 37.3
Min nTPM: 21.7
RHH5233_R3605
33.3
RHH5205_R3576
36.8
RHH5262_R3634
37.3
RHH5297_R3663
21.7
Memory CD4 T-cell TFH nTPM: 29.2
Samples: 4
Max nTPM: 35.9
Min nTPM: 20.7
RHH5300_R3666
27.5
RHH5236_R3608
32.5
RHH5265_R3637
20.7
RHH5208_R3579
35.9
Memory CD4 T-cell Th1 nTPM: 40.5
Samples: 4
Max nTPM: 51.9
Min nTPM: 20.6
RHH5210_R3581
20.6
RHH5302_R3668
45.9
RHH5238_R3610
51.9
RHH5267_R3639
43.5
Memory CD4 T-cell Th1/Th17 nTPM: 36.5
Samples: 4
Max nTPM: 50.6
Min nTPM: 15.9
RHH5303_R3669
30.5
RHH5211_R3582
15.9
RHH5239_R3611
48.8
RHH5268_R3640
50.6
Memory CD4 T-cell Th17 nTPM: 34.6
Samples: 4
Max nTPM: 47.3
Min nTPM: 19.3
RHH5304_R3670
39.9
RHH5212_R3583
31.9
RHH5240_R3612
47.3
RHH5269_R3641
19.3
Memory CD4 T-cell Th2 nTPM: 35.5
Samples: 4
Max nTPM: 55.6
Min nTPM: 24.2
RHH5305_R3671
55.6
RHH5213_R3584
29.2
RHH5241_R3613
24.2
RHH5270_R3642
33.0
Naive CD4 T-cell nTPM: 37.8
Samples: 4
Max nTPM: 49.6
Min nTPM: 27.6
RHH5306_R3672
34.2
RHH5214_R3585
49.6
RHH5242_R3614
27.6
RHH5271_R3643
39.9
Naive CD8 T-cell nTPM: 33.7
Samples: 4
Max nTPM: 40.2
Min nTPM: 25.7
RHH5201_R3572
25.7
RHH5229_R3601
35.6
RHH5258_R3630
33.3
RHH5287_R3659
40.2
Non-Vd2 gdTCR nTPM: 29.5
Samples: 4
Max nTPM: 40.5
Min nTPM: 18.8
RHH5235_R3607
30.5
RHH5264_R3636
18.8
RHH5207_R3578
40.5
RHH5299_R3665
28.1
T-reg nTPM: 33.4
Samples: 4
Max nTPM: 48.5
Min nTPM: 23.4
RHH5301_R3667
30.4
RHH5237_R3609
23.4
RHH5266_R3638
48.5
RHH5209_R3580
31.1
Terminal effector memory CD4 T-cell nTPM: 35.2
Samples: 2
Max nTPM: 40.9
Min nTPM: 29.4
RHH5243_R3615
40.9
RHH5272_R3644
29.4
Terminal effector memory CD8 T-cell nTPM: 40.0
Samples: 4
Max nTPM: 56.3
Min nTPM: 26.5
RHH5232_R3604
26.5
RHH5204_R3575
56.3
RHH5261_R3633
48.4
RHH5296_R3662
28.6
Vd2 gdTCR nTPM: 41.8
Samples: 4
Max nTPM: 81.6
Min nTPM: 23.3
RHH5234_R3606
23.3
RHH5206_R3577
81.6
RHH5263_R3635
36.9
RHH5298_R3664
25.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
