HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.2 nTPM
HPA Brain:13.7 nTPM
GTEx:19.2 nTPM
FANTOM5:23.8 Scaled Tags Per Million
Pig:3.3 nTPM
Mouse:19.0 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039017
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
1911 Female, age 85, right hemisphere 15.3
1898 Male, age 80, left hemisphere 13.9
2529 Female, age 94, left hemisphere 13.5
2621 Female, age 67, right hemisphere 12.4
2148 Female, age 91, left hemisphere 11.3
1855 Male, age 76, left hemisphere 10.5
Dentate gyrus
nTPM: 13.3
2530 Female, age 94, left hemisphere 15.2
2528 Male, age 74, both hemispheres 14.5
2010 Male, age 76, both hemispheres 13.0
2246 Female, age 85, both hemispheres 12.5
1927 Female, age 91, both hemispheres 12.3
2531 Female, age 67, both hemispheres 12.1
Entorhinal gyrus
nTPM: 13.3
2764 Male, age 80, right hemisphere 15.9
1938 Female, age 85, left hemisphere 14.3
2117 Female, age 91, right hemisphere 13.7
1787 Male, age 76, left hemisphere 12.0
2613 Female, age 94, left hemisphere 11.9
2686 Male, age 75, right hemisphere 11.9
Hippocampus, CA1
nTPM: 13.4
2749 Male, age 80, left hemisphere 15.1
1873 Female, age 85, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.6
2527 Male, age 74, both hemispheres 12.2
2045 Male, age 76, both hemispheres 10.2
Hippocampus, CA2
nTPM: 13.3
1963 Male, age 80, left hemisphere 15.7
2113 Female, age 91, right hemisphere 13.9
2249 Male, age 74, both hemispheres 13.9
2437 Female, age 94, left hemisphere 13.1
1940 Female, age 85, left hemisphere 12.1
1892 Male, age 76, both hemispheres 11.2
Hippocampus, CA3
nTPM: 13.1
1891 Female, age 85, both hemispheres 15.0
2137 Male, age 80, left hemisphere 14.1
2620 Female, age 94, left hemisphere 13.4
2436 Male, age 74, both hemispheres 13.2
1867 Male, age 76, both hemispheres 12.7
2861 Female, age 67, both hemispheres 10.3
Parahippocampal cortex
nTPM: 13.5
1933 Female, age 85, both hemispheres 15.8
1850 Male, age 80, both hemispheres 15.5
2250 Female, age 67, right hemisphere 14.9
2692 Male, age 74, both hemispheres 14.8
2532 Female, age 72, left hemisphere 13.8
1990 Female, age 91, right hemisphere 13.3
2245 Female, age 91, both hemispheres 13.3
2693 Female, age 94, both hemispheres 12.6
2622 Female, age 67, right hemisphere 11.9
2018 Male, age 76, both hemispheres 9.5
Perirhinal gyrus
nTPM: 13.3
1794 Male, age 80, right hemisphere 16.1
2521 Female, age 94, right hemisphere 14.0
1847 Female, age 91, left hemisphere 12.7
1841 Female, age 85, right hemisphere 12.4
2848 Male, age 76, right hemisphere 11.5
Subiculum
nTPM: 13.7
2042 Male, age 76, both hemispheres 17.8
1977 Female, age 85, both hemispheres 15.2
2619 Male, age 74, both hemispheres 13.9
1901 Male, age 80, both hemispheres 13.4
2729 Female, age 91, right hemisphere 12.3
2438 Female, age 94, left hemisphere 9.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.2
Samples: 197

Max nTPM: 38.9
Min nTPM: 4.7
Std nTPM: 5.9
Median nTPM: 18.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 33.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 33.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 33.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 33.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 30.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 29.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 29.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 29.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.8
FF:10169-103B7 60 years, female 23.8
FF:10153-102I9 76 years, female 23.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.3
Pig sample Sample description nTPM
Subiculum
nTPM: 3.1
Samples: 4

Max nTPM: 3.8
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 3.8
Sample C Male 3.5
Sample D Male 2.5
Dorsal hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 3.9
Min nTPM: 2.1
Sample A Female 3.5
Sample B Female 3.5
Sample C Male 3.9
Sample D Male 2.1
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.1
Sample A Female 2.1
Sample B Female 3.3
Sample C Male 3.3
Sample D Male 2.7
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.6
Sample A Female 3.0
Sample B Female 3.2
Sample C Male 4.1
Sample D Male 2.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.8
Sample A Male 18.4
Sample B Male 20.2
Sample C Female 17.8
Sample D Female 19.4
Hippocampal formation
nTPM: 16.6
Samples: 4

Max nTPM: 19.3
Min nTPM: 13.9
Sample A Male 19.3
Sample B Male 16.6
Sample C Female 13.9
Sample D Female 16.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68861797 Antisense, RP_050301_01_A04, Mouse strain C57BL/6J (56 days, male) 0.3

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