We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.6
nTPM
Monaco:
130.5
nTPM
Schmiedel:
59.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.6
HPA sample
nTPM
gdT-cell nTPM: 51.6
Samples: 6
Max nTPM: 74.3
Min nTPM: 38.6
P10809_1007
38.6
P10809_1022
48.3
P10809_1041
43.6
P10809_1060
57.5
P10809_1077
47.0
P10809_1098
74.3
MAIT T-cell nTPM: 32.5
Samples: 6
Max nTPM: 48.7
Min nTPM: 21.2
P10809_1006
28.0
P10809_1024
24.9
P10809_1043
31.7
P10809_1062
40.3
P10809_1083
21.2
P10809_1097
48.7
Memory CD4 T-cell nTPM: 31.1
Samples: 6
Max nTPM: 37.3
Min nTPM: 22.8
P10809_1014
28.9
P10809_1026
22.8
P10809_1045
34.0
P10809_1064
37.3
P10809_1086
30.9
P10809_1113
32.7
Memory CD8 T-cell nTPM: 46.4
Samples: 5
Max nTPM: 58.1
Min nTPM: 32.4
P10809_1012
32.4
P10809_1027
56.2
P10809_1046
36.9
P10809_1065
48.6
P10809_1111
58.1
Naive CD4 T-cell nTPM: 20.1
Samples: 6
Max nTPM: 25.9
Min nTPM: 15.7
P10809_1015
15.7
P10809_1030
20.0
P10809_1049
16.9
P10809_1068
20.2
P10809_1085
22.1
P10809_1112
25.9
Naive CD8 T-cell nTPM: 35.9
Samples: 6
Max nTPM: 45.8
Min nTPM: 17.5
P10809_1016
17.5
P10809_1031
37.1
P10809_1050
38.9
P10809_1069
45.4
P10809_1087
45.8
P10809_1110
30.7
T-reg nTPM: 37.7
Samples: 6
Max nTPM: 48.9
Min nTPM: 30.4
P10809_1018
34.1
P10809_1037
34.1
P10809_1056
30.4
P10809_1075
48.9
P10809_1094
31.2
P10809_1106
47.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.0
Samples: 4
Max nTPM: 65.0
Min nTPM: 56.4
RHH5202_R3573
56.4
RHH5230_R3602
63.3
RHH5259_R3631
65.0
RHH5288_R3660
59.4
Effector memory CD8 T-cell nTPM: 111.1
Samples: 4
Max nTPM: 121.2
Min nTPM: 102.2
RHH5203_R3574
110.5
RHH5231_R3603
110.4
RHH5260_R3632
121.2
RHH5289_R3661
102.2
MAIT T-cell nTPM: 79.4
Samples: 4
Max nTPM: 88.4
Min nTPM: 67.7
RHH5233_R3605
80.3
RHH5205_R3576
67.7
RHH5262_R3634
81.2
RHH5297_R3663
88.4
Memory CD4 T-cell TFH nTPM: 58.2
Samples: 4
Max nTPM: 71.7
Min nTPM: 48.7
RHH5300_R3666
48.7
RHH5236_R3608
71.7
RHH5265_R3637
51.3
RHH5208_R3579
61.0
Memory CD4 T-cell Th1 nTPM: 60.3
Samples: 4
Max nTPM: 63.5
Min nTPM: 55.7
RHH5210_R3581
55.7
RHH5302_R3668
63.5
RHH5238_R3610
61.4
RHH5267_R3639
60.4
Memory CD4 T-cell Th1/Th17 nTPM: 62.9
Samples: 4
Max nTPM: 80.9
Min nTPM: 41.9
RHH5303_R3669
75.3
RHH5211_R3582
80.9
RHH5239_R3611
41.9
RHH5268_R3640
53.3
Memory CD4 T-cell Th17 nTPM: 58.4
Samples: 4
Max nTPM: 75.9
Min nTPM: 50.6
RHH5304_R3670
50.6
RHH5212_R3583
75.9
RHH5240_R3612
55.2
RHH5269_R3641
51.7
Memory CD4 T-cell Th2 nTPM: 53.2
Samples: 4
Max nTPM: 64.7
Min nTPM: 39.5
RHH5305_R3671
56.9
RHH5213_R3584
64.7
RHH5241_R3613
39.5
RHH5270_R3642
51.7
Naive CD4 T-cell nTPM: 44.1
Samples: 4
Max nTPM: 53.1
Min nTPM: 32.6
RHH5306_R3672
46.2
RHH5214_R3585
53.1
RHH5242_R3614
32.6
RHH5271_R3643
44.4
Naive CD8 T-cell nTPM: 41.5
Samples: 4
Max nTPM: 47.6
Min nTPM: 38.7
RHH5201_R3572
47.6
RHH5229_R3601
39.8
RHH5258_R3630
38.7
RHH5287_R3659
39.8
Non-Vd2 gdTCR nTPM: 124.9
Samples: 4
Max nTPM: 148.2
Min nTPM: 115.0
RHH5235_R3607
116.1
RHH5264_R3636
148.2
RHH5207_R3578
120.4
RHH5299_R3665
115.0
T-reg nTPM: 50.0
Samples: 4
Max nTPM: 57.0
Min nTPM: 40.7
RHH5301_R3667
40.7
RHH5237_R3609
51.2
RHH5266_R3638
51.0
RHH5209_R3580
57.0
Terminal effector memory CD4 T-cell nTPM: 86.2
Samples: 2
Max nTPM: 86.8
Min nTPM: 85.5
RHH5243_R3615
85.5
RHH5272_R3644
86.8
Terminal effector memory CD8 T-cell nTPM: 130.5
Samples: 4
Max nTPM: 145.4
Min nTPM: 114.8
RHH5232_R3604
145.4
RHH5204_R3575
118.2
RHH5261_R3633
143.5
RHH5296_R3662
114.8
Vd2 gdTCR nTPM: 115.8
Samples: 4
Max nTPM: 148.3
Min nTPM: 91.6
RHH5234_R3606
91.6
RHH5206_R3577
148.3
RHH5263_R3635
128.3
RHH5298_R3664
95.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
