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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.6
nTPM
Monaco:
147.2
nTPM
Schmiedel:
32.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.6
HPA sample
nTPM
gdT-cell nTPM: 42.8
Samples: 6
Max nTPM: 53.4
Min nTPM: 33.9
P10809_1007
33.9
P10809_1022
50.9
P10809_1041
53.4
P10809_1060
43.2
P10809_1077
36.5
P10809_1098
38.6
MAIT T-cell nTPM: 41.7
Samples: 6
Max nTPM: 51.9
Min nTPM: 27.6
P10809_1006
44.2
P10809_1024
51.9
P10809_1043
41.4
P10809_1062
41.9
P10809_1083
27.6
P10809_1097
43.0
Memory CD4 T-cell nTPM: 42.5
Samples: 6
Max nTPM: 50.5
Min nTPM: 36.0
P10809_1014
38.3
P10809_1026
38.7
P10809_1045
50.5
P10809_1064
36.0
P10809_1086
45.3
P10809_1113
46.0
Memory CD8 T-cell nTPM: 43.9
Samples: 5
Max nTPM: 50.0
Min nTPM: 35.9
P10809_1012
44.2
P10809_1027
50.0
P10809_1046
40.2
P10809_1065
35.9
P10809_1111
49.4
Naive CD4 T-cell nTPM: 36.2
Samples: 6
Max nTPM: 44.9
Min nTPM: 28.7
P10809_1015
28.7
P10809_1030
35.8
P10809_1049
36.8
P10809_1068
36.0
P10809_1085
44.9
P10809_1112
34.7
Naive CD8 T-cell nTPM: 32.4
Samples: 6
Max nTPM: 38.2
Min nTPM: 24.1
P10809_1016
24.1
P10809_1031
27.0
P10809_1050
33.7
P10809_1069
38.1
P10809_1087
38.2
P10809_1110
33.2
T-reg nTPM: 46.6
Samples: 6
Max nTPM: 65.8
Min nTPM: 33.8
P10809_1018
40.7
P10809_1037
42.6
P10809_1056
33.8
P10809_1075
49.9
P10809_1094
46.9
P10809_1106
65.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
147.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 123.4
Samples: 4
Max nTPM: 135.5
Min nTPM: 115.9
RHH5202_R3573
135.5
RHH5230_R3602
115.9
RHH5259_R3631
123.9
RHH5288_R3660
118.3
Effector memory CD8 T-cell nTPM: 139.0
Samples: 4
Max nTPM: 183.5
Min nTPM: 91.0
RHH5203_R3574
183.5
RHH5231_R3603
91.0
RHH5260_R3632
145.3
RHH5289_R3661
136.2
MAIT T-cell nTPM: 131.6
Samples: 4
Max nTPM: 155.2
Min nTPM: 97.6
RHH5233_R3605
134.3
RHH5205_R3576
155.2
RHH5262_R3634
139.4
RHH5297_R3663
97.6
Memory CD4 T-cell TFH nTPM: 134.3
Samples: 4
Max nTPM: 154.0
Min nTPM: 115.3
RHH5300_R3666
115.3
RHH5236_R3608
143.3
RHH5265_R3637
154.0
RHH5208_R3579
124.7
Memory CD4 T-cell Th1 nTPM: 123.5
Samples: 4
Max nTPM: 141.8
Min nTPM: 100.7
RHH5210_R3581
119.6
RHH5302_R3668
100.7
RHH5238_R3610
131.8
RHH5267_R3639
141.8
Memory CD4 T-cell Th1/Th17 nTPM: 147.2
Samples: 4
Max nTPM: 167.2
Min nTPM: 124.4
RHH5303_R3669
124.4
RHH5211_R3582
165.3
RHH5239_R3611
167.2
RHH5268_R3640
131.9
Memory CD4 T-cell Th17 nTPM: 145.4
Samples: 4
Max nTPM: 164.3
Min nTPM: 120.8
RHH5304_R3670
120.8
RHH5212_R3583
146.3
RHH5240_R3612
164.3
RHH5269_R3641
150.0
Memory CD4 T-cell Th2 nTPM: 138.8
Samples: 4
Max nTPM: 175.4
Min nTPM: 106.2
RHH5305_R3671
106.2
RHH5213_R3584
175.4
RHH5241_R3613
122.2
RHH5270_R3642
151.4
Naive CD4 T-cell nTPM: 97.9
Samples: 4
Max nTPM: 109.8
Min nTPM: 74.7
RHH5306_R3672
74.7
RHH5214_R3585
101.6
RHH5242_R3614
105.3
RHH5271_R3643
109.8
Naive CD8 T-cell nTPM: 83.5
Samples: 4
Max nTPM: 103.3
Min nTPM: 67.1
RHH5201_R3572
103.3
RHH5229_R3601
67.1
RHH5258_R3630
79.0
RHH5287_R3659
84.5
Non-Vd2 gdTCR nTPM: 129.0
Samples: 4
Max nTPM: 159.8
Min nTPM: 106.4
RHH5235_R3607
142.4
RHH5264_R3636
106.4
RHH5207_R3578
159.8
RHH5299_R3665
107.4
T-reg nTPM: 114.1
Samples: 4
Max nTPM: 118.2
Min nTPM: 109.7
RHH5301_R3667
111.5
RHH5237_R3609
109.7
RHH5266_R3638
116.9
RHH5209_R3580
118.2
Terminal effector memory CD4 T-cell nTPM: 122.4
Samples: 2
Max nTPM: 125.9
Min nTPM: 118.9
RHH5243_R3615
125.9
RHH5272_R3644
118.9
Terminal effector memory CD8 T-cell nTPM: 134.0
Samples: 4
Max nTPM: 147.6
Min nTPM: 122.5
RHH5232_R3604
122.5
RHH5204_R3575
131.1
RHH5261_R3633
147.6
RHH5296_R3662
134.7
Vd2 gdTCR nTPM: 116.9
Samples: 4
Max nTPM: 141.3
Min nTPM: 93.6
RHH5234_R3606
128.9
RHH5206_R3577
103.8
RHH5263_R3635
141.3
RHH5298_R3664
93.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
