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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
414.1
nTPM
FANTOM5:
594.7
Scaled Tags Per Million
Pig:
272.0
nTPM
Allen mouse:
5.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
414.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 345.5
2090
Male, age 80, both hemispheres
379.9
2301
Female, age 85, both hemispheres
353.4
2188
Female, age 91, both hemispheres
348.4
1984
Male, age 76, both hemispheres
300.3
Dorsal cochlear nucleus nTPM: 384.1
2378
Male, age 80, both hemispheres
398.4
2370
Male, age 61, both hemispheres
391.5
2802
Male, age 74, right hemisphere
389.3
2058
Male, age 76, both hemispheres
382.1
2187
Female, age 91, both hemispheres
359.1
Dorsal tegmental nucleus nTPM: 376.9
2358
Male, age 61, both hemispheres
389.8
2083
Male, age 80, both hemispheres
382.8
1936
Male, age 76, left hemisphere
376.9
2326
Male, age 74, both hemispheres
358.1
Dorsolateral tegmental area nTPM: 401.1
2337
Male, age 61, both hemispheres
445.3
2751
Female, age 85, both hemispheres
427.6
2654
Male, age 80, both hemispheres
410.7
2360
Male, age 74, both hemispheres
375.1
2141
Male, age 76, both hemispheres
347.0
Kolliker-Fuse nucleus nTPM: 414.1
2315
Male, age 76, right hemisphere
550.6
2793
Female, age 91, left hemisphere
348.5
2163
Male, age 80, both hemispheres
343.0
Lateral lemniscal nuclei nTPM: 339.4
2036
Male, age 80, both hemispheres
409.5
2746
Female, age 85, left hemisphere
359.3
2320
Female, age 91, left hemisphere
315.7
2169
Male, age 76, both hemispheres
310.5
2453
Male, age 74, right hemisphere
302.0
Lateral parabrachial nucleus nTPM: 411.8
2792
Male, age 76, both hemispheres
525.6
2013
Male, age 80, both hemispheres
412.9
2139
Female, age 85, right hemisphere
383.5
2790
Male, age 61, both hemispheres
325.3
Lateral vestibular nucleus nTPM: 351.2
2311
Male, age 80, both hemispheres
373.3
2184
Male, age 76, both hemispheres
329.1
Locus coeruleus nTPM: 354.7
2317
Female, age 72, unknown
383.0
2123
Female, age 91, both hemispheres
375.4
1980
Male, age 76, both hemispheres
373.9
2014
Male, age 55, unknown
371.1
2788
Male, age 74, unknown
352.8
2162
Male, age 80, both hemispheres
314.1
2720
Male, age 74, both hemispheres
312.6
Medial parabrachial nucleus nTPM: 353.5
2170
Female, age 91, both hemispheres
387.2
2854
Male, age 80, both hemispheres
374.1
2463
Female, age 85, right hemisphere
361.2
2786
Male, age 76, both hemispheres
346.0
2156
Male, age 61, both hemispheres
298.8
Medial periolivary nuclei nTPM: 333.0
2791
Male, age 74, right hemisphere
375.9
2081
Male, age 80, both hemispheres
360.8
2063
Male, age 76, both hemispheres
336.3
2171
Female, age 85, both hemispheres
300.5
2458
Female, age 91, both hemispheres
291.3
Motor facial nucleus nTPM: 324.1
2795
Female, age 91, both hemispheres
370.8
2126
Male, age 61, both hemispheres
343.9
2365
Male, age 74, right hemisphere
336.6
2062
Male, age 76, both hemispheres
334.1
2697
Female, age 85, both hemispheres
307.0
2327
Male, age 80, both hemispheres
251.9
Motor trigeminal nucleus nTPM: 316.6
2309
Male, age 76, both hemispheres
338.8
2560
Male, age 74, both hemispheres
328.8
2079
Male, age 80, both hemispheres
314.7
2335
Male, age 61, both hemispheres
312.2
2321
Female, age 91, both hemispheres
288.5
Nuclei of the trapezoid body nTPM: 320.2
1983
Male, age 76, both hemispheres
334.0
2368
Female, age 91, both hemispheres
333.4
2166
Male, age 80, both hemispheres
314.6
2735
Female, age 85, both hemispheres
312.0
2159
Male, age 61, both hemispheres
307.1
Nucleus raphe magnus nTPM: 318.0
2051
Male, age 76, both hemispheres
362.2
2160
Male, age 61, both hemispheres
336.7
2455
Male, age 74, both hemispheres
319.9
2459
Female, age 91, both hemispheres
316.3
2328
Male, age 80, both hemispheres
308.9
2172
Female, age 85, both hemispheres
264.3
Paramedian reticular nucleus nTPM: 371.3
2052
Male, age 76, both hemispheres
405.5
2057
Male, age 80, both hemispheres
386.5
2050
Female, age 85, both hemispheres
353.2
2313
Male, age 61, both hemispheres
339.9
Pedunculopontine tegmental nucleus nTPM: 376.9
2338
Male, age 61, both hemispheres
391.4
2334
Male, age 80, both hemispheres
377.7
1921
Female, age 85, both hemispheres
361.6
Pontine nuclei nTPM: 336.8
2727
Male, age 61, right hemisphere
366.8
2109
Female, age 72, unknown
346.9
1863
Male, age 55, unknown
343.7
2115
Male, age 80, left hemisphere
340.5
2319
Female, age 91, both hemispheres
339.1
2454
Male, age 74, left hemisphere
333.8
1968
Male, age 76, left hemisphere
316.5
2787
Female, age 85, both hemispheres
307.5
Pontine raphe nucleus nTPM: 347.4
2853
Male, age 76, midline
366.5
2122
Female, age 85, midline
328.4
Posteroventral cochlear nucleus nTPM: 382.3
2371
Male, age 61, both hemispheres
421.7
2341
Male, age 80, both hemispheres
406.6
2135
Female, age 91, both hemispheres
378.9
2070
Male, age 76, both hemispheres
378.3
2752
Female, age 85, both hemispheres
326.3
Principal sensory trigeminal nucleus nTPM: 326.6
2324
Male, age 76, both hemispheres
336.1
2158
Male, age 61, both hemispheres
328.9
2367
Female, age 91, left hemisphere
328.7
2008
Male, age 80, left hemisphere
312.8
Reticular pontine nucleus, caudal nTPM: 314.2
2092
Male, age 76, both hemispheres
369.0
2559
Male, age 74, both hemispheres
318.9
2457
Female, age 91, both hemispheres
294.3
2332
Male, age 80, right hemisphere
274.4
Reticular pontine nucleus, oral nTPM: 364.7
1939
Male, age 80, both hemispheres
408.8
2167
Male, age 76, both hemispheres
381.0
2012
Female, age 85, both hemispheres
366.1
2361
Male, age 74, both hemispheres
352.9
2366
Female, age 91, both hemispheres
314.8
Reticulotegmental nucleus nTPM: 329.2
2333
Male, age 80, both hemispheres
354.8
2322
Female, age 91, both hemispheres
326.6
2325
Male, age 76, both hemispheres
319.7
2452
Male, age 74, both hemispheres
315.8
Spinal trigeminal nucleus, oral nTPM: 319.6
1978
Male, age 76, both hemispheres
334.7
2164
Male, age 80, both hemispheres
314.1
2737
Female, age 85, both hemispheres
310.0
Subcoeruleus area nTPM: 346.2
2369
Female, age 85, left hemisphere
449.9
1958
Male, age 80, both hemispheres
352.7
2451
Male, age 74, both hemispheres
327.2
2323
Female, age 91, left hemisphere
306.1
2089
Male, age 76, left hemisphere
295.1
Superior olive nTPM: 334.3
2364
Male, age 74, right hemisphere
369.1
2020
Male, age 76, both hemispheres
367.3
1875
Female, age 85, both hemispheres
333.1
2329
Male, age 80, right hemisphere
307.9
2561
Female, age 91, both hemispheres
294.4
Ventral periolivary nuclei nTPM: 330.9
2023
Male, age 76, both hemispheres
421.9
2130
Female, age 85, both hemispheres
315.6
2165
Male, age 80, both hemispheres
313.5
2794
Female, age 91, left hemisphere
272.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 352.8
2359
Male, age 61, both hemispheres
421.7
2840
Female, age 85, both hemispheres
361.0
2456
Female, age 91, both hemispheres
349.3
1959
Male, age 76, both hemispheres
346.1
2161
Male, age 80, both hemispheres
336.3
2449
Male, age 74, both hemispheres
302.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
272.0
Pig sample
Sample description
nTPM
Pons nTPM: 272.1
Samples: 4
Max nTPM: 291.7
Min nTPM: 249.5
Sample A
Female
265.4
Sample B
Female
249.5
Sample C
Male
291.7
Sample D
Male
281.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
