HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:216.3 nTPM
HPA Brain:323.7 nTPM
GTEx:216.3 nTPM
FANTOM5:482.7 Scaled Tags Per Million
Pig:210.7 nTPM
Mouse:243.3 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017378
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 323.7
Sample id Sample description nTPM
Hippocampus
nTPM: 322.5
1898 Male, age 80, left hemisphere 344.9
1855 Male, age 76, left hemisphere 331.0
2529 Female, age 94, left hemisphere 330.3
1911 Female, age 85, right hemisphere 313.4
2148 Female, age 91, left hemisphere 307.8
2621 Female, age 67, right hemisphere 307.5
Dentate gyrus
nTPM: 298.9
2010 Male, age 76, both hemispheres 352.2
2528 Male, age 74, both hemispheres 340.1
2246 Female, age 85, both hemispheres 308.1
2530 Female, age 94, left hemisphere 291.3
1927 Female, age 91, both hemispheres 273.2
2531 Female, age 67, both hemispheres 228.6
Entorhinal gyrus
nTPM: 291.6
2117 Female, age 91, right hemisphere 381.3
1938 Female, age 85, left hemisphere 320.2
1787 Male, age 76, left hemisphere 294.6
2764 Male, age 80, right hemisphere 285.1
2613 Female, age 94, left hemisphere 240.0
2686 Male, age 75, right hemisphere 228.5
Hippocampus, CA1
nTPM: 313.6
1873 Female, age 85, both hemispheres 333.8
2527 Male, age 74, both hemispheres 329.1
2045 Male, age 76, both hemispheres 305.2
2082 Female, age 91, right hemisphere 304.5
2749 Male, age 80, left hemisphere 295.4
Hippocampus, CA2
nTPM: 313.2
2249 Male, age 74, both hemispheres 372.9
1963 Male, age 80, left hemisphere 325.5
1940 Female, age 85, left hemisphere 313.8
2113 Female, age 91, right hemisphere 313.6
2437 Female, age 94, left hemisphere 280.3
1892 Male, age 76, both hemispheres 272.9
Hippocampus, CA3
nTPM: 311.5
2436 Male, age 74, both hemispheres 433.8
1891 Female, age 85, both hemispheres 333.8
1867 Male, age 76, both hemispheres 307.1
2620 Female, age 94, left hemisphere 281.9
2137 Male, age 80, left hemisphere 256.6
2861 Female, age 67, both hemispheres 255.8
Parahippocampal cortex
nTPM: 301.3
2250 Female, age 67, right hemisphere 335.0
2018 Male, age 76, both hemispheres 333.6
1933 Female, age 85, both hemispheres 321.3
2692 Male, age 74, both hemispheres 320.8
1850 Male, age 80, both hemispheres 305.1
1990 Female, age 91, right hemisphere 292.0
2622 Female, age 67, right hemisphere 290.6
2532 Female, age 72, left hemisphere 276.7
2693 Female, age 94, both hemispheres 274.9
2245 Female, age 91, both hemispheres 263.1
Perirhinal gyrus
nTPM: 299.0
1847 Female, age 91, left hemisphere 316.2
1841 Female, age 85, right hemisphere 315.3
1794 Male, age 80, right hemisphere 308.6
2521 Female, age 94, right hemisphere 286.6
2848 Male, age 76, right hemisphere 268.4
Subiculum
nTPM: 323.7
2729 Female, age 91, right hemisphere 362.9
2042 Male, age 76, both hemispheres 354.6
2619 Male, age 74, both hemispheres 333.6
1977 Female, age 85, both hemispheres 316.4
1901 Male, age 80, both hemispheres 308.0
2438 Female, age 94, left hemisphere 266.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 216.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 216.3
Samples: 197

Max nTPM: 343.2
Min nTPM: 134.9
Std nTPM: 40.6
Median nTPM: 215.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 343.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 318.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 318.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 302.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 301.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 300.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 294.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 289.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 289.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 289.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 285.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 482.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 482.7
FF:10153-102I9 76 years, female 532.4
FF:10169-103B7 60 years, female 433.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 210.7
Pig sample Sample description nTPM
Subiculum
nTPM: 199.5
Samples: 4

Max nTPM: 240.6
Min nTPM: 178.4
Sample A Female 240.6
Sample B Female 197.6
Sample C Male 181.2
Sample D Male 178.4
Dorsal hippocampus
nTPM: 210.8
Samples: 4

Max nTPM: 267.0
Min nTPM: 153.1
Sample A Female 267.0
Sample B Female 201.5
Sample C Male 221.4
Sample D Male 153.1
Entorhinal cortex
nTPM: 172.6
Samples: 4

Max nTPM: 192.6
Min nTPM: 136.9
Sample A Female 170.3
Sample B Female 192.6
Sample C Male 190.5
Sample D Male 136.9
Ventral hippocampus
nTPM: 203.1
Samples: 4

Max nTPM: 243.0
Min nTPM: 166.5
Sample A Female 213.1
Sample B Female 166.5
Sample C Male 243.0
Sample D Male 189.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 243.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 220.6
Samples: 4

Max nTPM: 231.8
Min nTPM: 212.9
Sample A Male 220.5
Sample B Male 212.9
Sample C Female 217.3
Sample D Female 231.8
Hippocampal formation
nTPM: 243.3
Samples: 4

Max nTPM: 260.0
Min nTPM: 227.0
Sample A Male 227.0
Sample B Male 238.0
Sample C Female 248.1
Sample D Female 260.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
68300908 Antisense, RP_041129_02_D05, Mouse strain C57BL/6J (56 days, male) 10.8
2663 Antisense, RP_Baylor_103335, Mouse strain C57BL/6J (56 days, male) 8.9

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