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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
588.5
nTPM
Monaco:
1176.3
nTPM
Schmiedel:
484.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
588.5
HPA sample
nTPM
gdT-cell nTPM: 560.9
Samples: 6
Max nTPM: 767.5
Min nTPM: 418.0
P10809_1007
418.0
P10809_1022
767.5
P10809_1041
652.7
P10809_1060
443.6
P10809_1077
553.9
P10809_1098
529.8
MAIT T-cell nTPM: 588.5
Samples: 6
Max nTPM: 801.5
Min nTPM: 491.6
P10809_1006
491.6
P10809_1024
801.5
P10809_1043
600.3
P10809_1062
578.7
P10809_1083
555.1
P10809_1097
503.8
Memory CD4 T-cell nTPM: 502.3
Samples: 6
Max nTPM: 558.8
Min nTPM: 420.7
P10809_1014
420.7
P10809_1026
498.8
P10809_1045
550.4
P10809_1064
507.6
P10809_1086
558.8
P10809_1113
477.3
Memory CD8 T-cell nTPM: 558.3
Samples: 5
Max nTPM: 645.7
Min nTPM: 483.1
P10809_1012
483.1
P10809_1027
645.7
P10809_1046
600.6
P10809_1065
555.0
P10809_1111
507.2
Naive CD4 T-cell nTPM: 439.9
Samples: 6
Max nTPM: 485.8
Min nTPM: 363.1
P10809_1015
363.1
P10809_1030
445.0
P10809_1049
443.6
P10809_1068
485.8
P10809_1085
465.0
P10809_1112
436.9
Naive CD8 T-cell nTPM: 503.2
Samples: 6
Max nTPM: 581.5
Min nTPM: 330.2
P10809_1016
330.2
P10809_1031
581.2
P10809_1050
541.4
P10809_1069
548.4
P10809_1087
581.5
P10809_1110
436.4
T-reg nTPM: 546.0
Samples: 6
Max nTPM: 590.9
Min nTPM: 485.6
P10809_1018
485.6
P10809_1037
590.9
P10809_1056
503.5
P10809_1075
535.0
P10809_1094
589.2
P10809_1106
571.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1176.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 942.8
Samples: 4
Max nTPM: 1032.4
Min nTPM: 825.7
RHH5202_R3573
903.9
RHH5230_R3602
1032.4
RHH5259_R3631
1009.1
RHH5288_R3660
825.7
Effector memory CD8 T-cell nTPM: 1086.7
Samples: 4
Max nTPM: 1337.2
Min nTPM: 972.2
RHH5203_R3574
992.4
RHH5231_R3603
972.2
RHH5260_R3632
1044.9
RHH5289_R3661
1337.2
MAIT T-cell nTPM: 972.8
Samples: 4
Max nTPM: 1123.3
Min nTPM: 841.3
RHH5233_R3605
1035.4
RHH5205_R3576
1123.3
RHH5262_R3634
891.3
RHH5297_R3663
841.3
Memory CD4 T-cell TFH nTPM: 932.1
Samples: 4
Max nTPM: 1187.7
Min nTPM: 801.9
RHH5300_R3666
838.2
RHH5236_R3608
1187.7
RHH5265_R3637
801.9
RHH5208_R3579
900.4
Memory CD4 T-cell Th1 nTPM: 884.6
Samples: 4
Max nTPM: 963.2
Min nTPM: 792.8
RHH5210_R3581
868.9
RHH5302_R3668
792.8
RHH5238_R3610
963.2
RHH5267_R3639
913.3
Memory CD4 T-cell Th1/Th17 nTPM: 1063.8
Samples: 4
Max nTPM: 1372.3
Min nTPM: 824.1
RHH5303_R3669
1094.4
RHH5211_R3582
964.4
RHH5239_R3611
1372.3
RHH5268_R3640
824.1
Memory CD4 T-cell Th17 nTPM: 1020.3
Samples: 4
Max nTPM: 1287.8
Min nTPM: 899.9
RHH5304_R3670
975.8
RHH5212_R3583
917.6
RHH5240_R3612
1287.8
RHH5269_R3641
899.9
Memory CD4 T-cell Th2 nTPM: 931.8
Samples: 4
Max nTPM: 1028.5
Min nTPM: 822.9
RHH5305_R3671
850.1
RHH5213_R3584
1025.6
RHH5241_R3613
1028.5
RHH5270_R3642
822.9
Naive CD4 T-cell nTPM: 793.2
Samples: 4
Max nTPM: 825.2
Min nTPM: 764.1
RHH5306_R3672
825.2
RHH5214_R3585
764.1
RHH5242_R3614
795.0
RHH5271_R3643
788.3
Naive CD8 T-cell nTPM: 839.2
Samples: 4
Max nTPM: 919.9
Min nTPM: 703.7
RHH5201_R3572
906.4
RHH5229_R3601
919.9
RHH5258_R3630
703.7
RHH5287_R3659
826.6
Non-Vd2 gdTCR nTPM: 1176.3
Samples: 4
Max nTPM: 1312.1
Min nTPM: 1060.6
RHH5235_R3607
1312.1
RHH5264_R3636
1060.6
RHH5207_R3578
1256.1
RHH5299_R3665
1076.2
T-reg nTPM: 846.7
Samples: 4
Max nTPM: 991.8
Min nTPM: 721.5
RHH5301_R3667
721.5
RHH5237_R3609
991.8
RHH5266_R3638
775.0
RHH5209_R3580
898.6
Terminal effector memory CD4 T-cell nTPM: 1158.1
Samples: 2
Max nTPM: 1238.6
Min nTPM: 1077.6
RHH5243_R3615
1238.6
RHH5272_R3644
1077.6
Terminal effector memory CD8 T-cell nTPM: 1145.5
Samples: 4
Max nTPM: 1227.1
Min nTPM: 1018.8
RHH5232_R3604
1227.1
RHH5204_R3575
1018.8
RHH5261_R3633
1187.3
RHH5296_R3662
1148.7
Vd2 gdTCR nTPM: 984.3
Samples: 4
Max nTPM: 1082.4
Min nTPM: 848.4
RHH5234_R3606
1023.0
RHH5206_R3577
983.5
RHH5263_R3635
1082.4
RHH5298_R3664
848.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.