We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.1
nTPM
Monaco:
198.1
nTPM
Schmiedel:
48.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.1
HPA sample
nTPM
gdT-cell nTPM: 24.7
Samples: 6
Max nTPM: 40.5
Min nTPM: 10.7
P10809_1007
10.7
P10809_1022
21.0
P10809_1041
17.9
P10809_1060
39.2
P10809_1077
18.6
P10809_1098
40.5
MAIT T-cell nTPM: 13.6
Samples: 6
Max nTPM: 27.3
Min nTPM: 5.5
P10809_1006
5.5
P10809_1024
14.4
P10809_1043
8.2
P10809_1062
9.0
P10809_1083
27.3
P10809_1097
17.2
Memory CD4 T-cell nTPM: 70.2
Samples: 6
Max nTPM: 132.9
Min nTPM: 51.5
P10809_1014
62.7
P10809_1026
55.8
P10809_1045
51.5
P10809_1064
62.6
P10809_1086
55.6
P10809_1113
132.9
Memory CD8 T-cell nTPM: 29.5
Samples: 5
Max nTPM: 60.3
Min nTPM: 15.5
P10809_1012
27.0
P10809_1027
24.2
P10809_1046
15.5
P10809_1065
20.3
P10809_1111
60.3
Naive CD4 T-cell nTPM: 49.4
Samples: 6
Max nTPM: 64.2
Min nTPM: 35.4
P10809_1015
48.5
P10809_1030
47.8
P10809_1049
35.4
P10809_1068
54.9
P10809_1085
45.7
P10809_1112
64.2
Naive CD8 T-cell nTPM: 15.7
Samples: 6
Max nTPM: 21.6
Min nTPM: 6.5
P10809_1016
6.5
P10809_1031
21.6
P10809_1050
11.5
P10809_1069
18.2
P10809_1087
15.2
P10809_1110
20.9
T-reg nTPM: 84.1
Samples: 6
Max nTPM: 143.0
Min nTPM: 51.2
P10809_1018
51.2
P10809_1037
62.4
P10809_1056
67.3
P10809_1075
113.8
P10809_1094
66.9
P10809_1106
143.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
198.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 69.2
Samples: 4
Max nTPM: 98.6
Min nTPM: 45.9
RHH5202_R3573
55.8
RHH5230_R3602
45.9
RHH5259_R3631
76.3
RHH5288_R3660
98.6
Effector memory CD8 T-cell nTPM: 84.7
Samples: 4
Max nTPM: 131.9
Min nTPM: 59.8
RHH5203_R3574
68.2
RHH5231_R3603
59.8
RHH5260_R3632
78.9
RHH5289_R3661
131.9
MAIT T-cell nTPM: 21.0
Samples: 4
Max nTPM: 25.2
Min nTPM: 17.0
RHH5233_R3605
25.2
RHH5205_R3576
22.5
RHH5262_R3634
17.0
RHH5297_R3663
19.2
Memory CD4 T-cell TFH nTPM: 133.9
Samples: 4
Max nTPM: 178.8
Min nTPM: 93.2
RHH5300_R3666
93.2
RHH5236_R3608
155.0
RHH5265_R3637
178.8
RHH5208_R3579
108.6
Memory CD4 T-cell Th1 nTPM: 102.5
Samples: 4
Max nTPM: 131.3
Min nTPM: 83.0
RHH5210_R3581
83.0
RHH5302_R3668
93.5
RHH5238_R3610
102.0
RHH5267_R3639
131.3
Memory CD4 T-cell Th1/Th17 nTPM: 97.0
Samples: 4
Max nTPM: 139.4
Min nTPM: 72.9
RHH5303_R3669
92.5
RHH5211_R3582
72.9
RHH5239_R3611
83.3
RHH5268_R3640
139.4
Memory CD4 T-cell Th17 nTPM: 198.1
Samples: 4
Max nTPM: 285.4
Min nTPM: 124.0
RHH5304_R3670
124.0
RHH5212_R3583
151.8
RHH5240_R3612
285.4
RHH5269_R3641
231.0
Memory CD4 T-cell Th2 nTPM: 157.7
Samples: 4
Max nTPM: 201.2
Min nTPM: 88.0
RHH5305_R3671
151.2
RHH5213_R3584
88.0
RHH5241_R3613
190.2
RHH5270_R3642
201.2
Naive CD4 T-cell nTPM: 96.9
Samples: 4
Max nTPM: 114.7
Min nTPM: 81.4
RHH5306_R3672
93.7
RHH5214_R3585
97.8
RHH5242_R3614
81.4
RHH5271_R3643
114.7
Naive CD8 T-cell nTPM: 18.7
Samples: 4
Max nTPM: 26.9
Min nTPM: 7.8
RHH5201_R3572
21.7
RHH5229_R3601
7.8
RHH5258_R3630
18.5
RHH5287_R3659
26.9
Non-Vd2 gdTCR nTPM: 96.7
Samples: 4
Max nTPM: 160.0
Min nTPM: 34.5
RHH5235_R3607
34.5
RHH5264_R3636
95.4
RHH5207_R3578
160.0
RHH5299_R3665
97.0
T-reg nTPM: 137.5
Samples: 4
Max nTPM: 180.6
Min nTPM: 103.9
RHH5301_R3667
117.8
RHH5237_R3609
147.7
RHH5266_R3638
180.6
RHH5209_R3580
103.9
Terminal effector memory CD4 T-cell nTPM: 96.9
Samples: 2
Max nTPM: 104.6
Min nTPM: 89.2
RHH5243_R3615
89.2
RHH5272_R3644
104.6
Terminal effector memory CD8 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 86.2
Min nTPM: 66.3
RHH5232_R3604
85.4
RHH5204_R3575
66.3
RHH5261_R3633
86.2
RHH5296_R3662
67.6
Vd2 gdTCR nTPM: 46.3
Samples: 4
Max nTPM: 54.7
Min nTPM: 32.1
RHH5234_R3606
32.1
RHH5206_R3577
44.6
RHH5263_R3635
54.7
RHH5298_R3664
53.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
