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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.4
nTPM
Monaco:
125.4
nTPM
Schmiedel:
159.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.4
HPA sample
nTPM
gdT-cell nTPM: 38.9
Samples: 6
Max nTPM: 48.3
Min nTPM: 27.8
P10809_1007
27.8
P10809_1022
48.3
P10809_1041
34.8
P10809_1060
42.9
P10809_1077
38.3
P10809_1098
41.5
MAIT T-cell nTPM: 45.5
Samples: 6
Max nTPM: 51.3
Min nTPM: 38.3
P10809_1006
50.3
P10809_1024
51.3
P10809_1043
38.3
P10809_1062
46.1
P10809_1083
43.9
P10809_1097
42.8
Memory CD4 T-cell nTPM: 42.1
Samples: 6
Max nTPM: 49.7
Min nTPM: 38.2
P10809_1014
38.6
P10809_1026
38.6
P10809_1045
38.2
P10809_1064
46.7
P10809_1086
49.7
P10809_1113
40.9
Memory CD8 T-cell nTPM: 39.5
Samples: 5
Max nTPM: 45.0
Min nTPM: 34.5
P10809_1012
34.5
P10809_1027
38.1
P10809_1046
36.1
P10809_1065
45.0
P10809_1111
43.8
Naive CD4 T-cell nTPM: 48.7
Samples: 6
Max nTPM: 53.7
Min nTPM: 39.5
P10809_1015
46.9
P10809_1030
50.0
P10809_1049
39.5
P10809_1068
51.5
P10809_1085
53.7
P10809_1112
50.6
Naive CD8 T-cell nTPM: 43.5
Samples: 6
Max nTPM: 53.2
Min nTPM: 37.1
P10809_1016
39.2
P10809_1031
37.1
P10809_1050
40.1
P10809_1069
53.2
P10809_1087
46.3
P10809_1110
45.2
T-reg nTPM: 49.4
Samples: 6
Max nTPM: 62.5
Min nTPM: 37.5
P10809_1018
42.7
P10809_1037
50.4
P10809_1056
37.5
P10809_1075
59.8
P10809_1094
62.5
P10809_1106
43.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 117.7
Samples: 4
Max nTPM: 139.2
Min nTPM: 101.2
RHH5202_R3573
139.2
RHH5230_R3602
122.7
RHH5259_R3631
107.5
RHH5288_R3660
101.2
Effector memory CD8 T-cell nTPM: 112.3
Samples: 4
Max nTPM: 124.2
Min nTPM: 96.5
RHH5203_R3574
119.6
RHH5231_R3603
96.5
RHH5260_R3632
108.7
RHH5289_R3661
124.2
MAIT T-cell nTPM: 120.6
Samples: 4
Max nTPM: 136.7
Min nTPM: 99.8
RHH5233_R3605
124.4
RHH5205_R3576
136.7
RHH5262_R3634
121.5
RHH5297_R3663
99.8
Memory CD4 T-cell TFH nTPM: 119.8
Samples: 4
Max nTPM: 137.4
Min nTPM: 92.9
RHH5300_R3666
92.9
RHH5236_R3608
131.7
RHH5265_R3637
117.0
RHH5208_R3579
137.4
Memory CD4 T-cell Th1 nTPM: 110.3
Samples: 4
Max nTPM: 119.2
Min nTPM: 99.0
RHH5210_R3581
119.2
RHH5302_R3668
99.0
RHH5238_R3610
115.4
RHH5267_R3639
107.7
Memory CD4 T-cell Th1/Th17 nTPM: 115.4
Samples: 4
Max nTPM: 124.0
Min nTPM: 105.3
RHH5303_R3669
105.3
RHH5211_R3582
120.4
RHH5239_R3611
124.0
RHH5268_R3640
112.0
Memory CD4 T-cell Th17 nTPM: 122.2
Samples: 4
Max nTPM: 150.9
Min nTPM: 88.8
RHH5304_R3670
129.2
RHH5212_R3583
88.8
RHH5240_R3612
150.9
RHH5269_R3641
119.7
Memory CD4 T-cell Th2 nTPM: 125.4
Samples: 4
Max nTPM: 132.5
Min nTPM: 116.9
RHH5305_R3671
116.9
RHH5213_R3584
132.4
RHH5241_R3613
132.5
RHH5270_R3642
119.7
Naive CD4 T-cell nTPM: 122.3
Samples: 4
Max nTPM: 150.8
Min nTPM: 108.3
RHH5306_R3672
112.1
RHH5214_R3585
108.3
RHH5242_R3614
117.9
RHH5271_R3643
150.8
Naive CD8 T-cell nTPM: 124.3
Samples: 4
Max nTPM: 138.6
Min nTPM: 103.0
RHH5201_R3572
138.6
RHH5229_R3601
124.9
RHH5258_R3630
103.0
RHH5287_R3659
130.8
Non-Vd2 gdTCR nTPM: 106.7
Samples: 4
Max nTPM: 113.8
Min nTPM: 95.6
RHH5235_R3607
107.5
RHH5264_R3636
113.8
RHH5207_R3578
110.0
RHH5299_R3665
95.6
T-reg nTPM: 104.3
Samples: 4
Max nTPM: 112.5
Min nTPM: 96.0
RHH5301_R3667
96.0
RHH5237_R3609
106.8
RHH5266_R3638
112.5
RHH5209_R3580
101.9
Terminal effector memory CD4 T-cell nTPM: 114.9
Samples: 2
Max nTPM: 129.1
Min nTPM: 100.6
RHH5243_R3615
129.1
RHH5272_R3644
100.6
Terminal effector memory CD8 T-cell nTPM: 95.0
Samples: 4
Max nTPM: 99.0
Min nTPM: 90.2
RHH5232_R3604
99.0
RHH5204_R3575
91.8
RHH5261_R3633
98.9
RHH5296_R3662
90.2
Vd2 gdTCR nTPM: 110.6
Samples: 4
Max nTPM: 129.3
Min nTPM: 94.2
RHH5234_R3606
103.6
RHH5206_R3577
115.1
RHH5263_R3635
129.3
RHH5298_R3664
94.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
