HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:21.1 nTPM
HPA Brain:33.3 nTPM
GTEx:21.1 nTPM
FANTOM5:35.9 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:28.3 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059511
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.3
Sample id Sample description nTPM
Hippocampus
nTPM: 33.3
2529 Female, age 94, left hemisphere 40.9
2148 Female, age 91, left hemisphere 39.8
2621 Female, age 67, right hemisphere 36.6
1911 Female, age 85, right hemisphere 28.5
1855 Male, age 76, left hemisphere 27.8
1898 Male, age 80, left hemisphere 25.9
Dentate gyrus
nTPM: 30.6
1927 Female, age 91, both hemispheres 37.8
2530 Female, age 94, left hemisphere 37.2
2010 Male, age 76, both hemispheres 28.7
2531 Female, age 67, both hemispheres 28.2
2246 Female, age 85, both hemispheres 27.6
2528 Male, age 74, both hemispheres 24.3
Entorhinal gyrus
nTPM: 28.6
2117 Female, age 91, right hemisphere 30.9
1787 Male, age 76, left hemisphere 29.7
2686 Male, age 75, right hemisphere 29.1
2764 Male, age 80, right hemisphere 28.1
1938 Female, age 85, left hemisphere 27.8
2613 Female, age 94, left hemisphere 26.0
Hippocampus, CA1
nTPM: 31.0
2749 Male, age 80, left hemisphere 49.9
1873 Female, age 85, both hemispheres 30.5
2527 Male, age 74, both hemispheres 25.5
2082 Female, age 91, right hemisphere 25.2
2045 Male, age 76, both hemispheres 23.8
Hippocampus, CA2
nTPM: 28.1
1963 Male, age 80, left hemisphere 33.4
1940 Female, age 85, left hemisphere 31.6
2437 Female, age 94, left hemisphere 30.2
1892 Male, age 76, both hemispheres 25.3
2113 Female, age 91, right hemisphere 25.1
2249 Male, age 74, both hemispheres 23.2
Hippocampus, CA3
nTPM: 29.5
2137 Male, age 80, left hemisphere 35.1
2861 Female, age 67, both hemispheres 35.1
2620 Female, age 94, left hemisphere 33.6
1867 Male, age 76, both hemispheres 26.4
1891 Female, age 85, both hemispheres 25.6
2436 Male, age 74, both hemispheres 21.4
Parahippocampal cortex
nTPM: 25.8
2245 Female, age 91, both hemispheres 34.5
1990 Female, age 91, right hemisphere 29.9
2622 Female, age 67, right hemisphere 29.5
2250 Female, age 67, right hemisphere 28.3
2532 Female, age 72, left hemisphere 24.1
1933 Female, age 85, both hemispheres 23.9
2692 Male, age 74, both hemispheres 23.9
2018 Male, age 76, both hemispheres 23.3
1850 Male, age 80, both hemispheres 21.4
2693 Female, age 94, both hemispheres 19.5
Perirhinal gyrus
nTPM: 21.8
1847 Female, age 91, left hemisphere 22.9
2848 Male, age 76, right hemisphere 22.7
1794 Male, age 80, right hemisphere 22.2
2521 Female, age 94, right hemisphere 21.4
1841 Female, age 85, right hemisphere 19.6
Subiculum
nTPM: 29.2
2438 Female, age 94, left hemisphere 34.8
2042 Male, age 76, both hemispheres 29.4
2619 Male, age 74, both hemispheres 28.5
1901 Male, age 80, both hemispheres 28.2
1977 Female, age 85, both hemispheres 27.5
2729 Female, age 91, right hemisphere 27.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.1
Samples: 197

Max nTPM: 82.8
Min nTPM: 9.7
Std nTPM: 8.9
Median nTPM: 18.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 82.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 75.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 54.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 40.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 37.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 37.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 37.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 36.4
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 36.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 36.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.9
FF:10153-102I9 76 years, female 46.0
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.1
Pig sample Sample description nTPM
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 19.4
Min nTPM: 11.5
Sample A Female 19.4
Sample B Female 11.5
Sample C Male 11.8
Sample D Male 12.4
Dorsal hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 14.7
Min nTPM: 9.1
Sample A Female 13.5
Sample B Female 9.1
Sample C Male 14.7
Sample D Male 10.3
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 21.2
Min nTPM: 13.6
Sample A Female 17.9
Sample B Female 21.2
Sample C Male 13.6
Sample D Male 19.8
Ventral hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 10.8
Min nTPM: 6.2
Sample A Female 7.3
Sample B Female 6.2
Sample C Male 9.0
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 30.1
Min nTPM: 19.7
Sample A Male 27.4
Sample B Male 30.1
Sample C Female 23.1
Sample D Female 19.7
Hippocampal formation
nTPM: 28.3
Samples: 4

Max nTPM: 34.4
Min nTPM: 23.3
Sample A Male 23.3
Sample B Male 28.2
Sample C Female 34.4
Sample D Female 27.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
70431415 Antisense, RP_050614_02_G10, Mouse strain C57BL/6J (56 days, male) 13.5
73930842 Antisense, RP_051214_04_D04, Mouse strain C57BL/6J (56 days, male) 9.7

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