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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.9
nTPM
Monaco:
107.8
nTPM
Schmiedel:
240.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.9
HPA sample
nTPM
gdT-cell nTPM: 41.6
Samples: 6
Max nTPM: 63.7
Min nTPM: 25.9
P10809_1007
25.9
P10809_1022
44.1
P10809_1041
63.7
P10809_1060
41.0
P10809_1077
46.2
P10809_1098
28.6
MAIT T-cell nTPM: 38.4
Samples: 6
Max nTPM: 52.4
Min nTPM: 22.8
P10809_1006
35.9
P10809_1024
52.4
P10809_1043
46.7
P10809_1062
47.9
P10809_1083
22.8
P10809_1097
24.9
Memory CD4 T-cell nTPM: 34.6
Samples: 6
Max nTPM: 47.0
Min nTPM: 21.3
P10809_1014
21.3
P10809_1026
37.9
P10809_1045
47.0
P10809_1064
37.4
P10809_1086
34.0
P10809_1113
30.1
Memory CD8 T-cell nTPM: 38.4
Samples: 5
Max nTPM: 58.2
Min nTPM: 28.6
P10809_1012
34.8
P10809_1027
28.6
P10809_1046
58.2
P10809_1065
36.4
P10809_1111
33.8
Naive CD4 T-cell nTPM: 24.9
Samples: 6
Max nTPM: 38.8
Min nTPM: 15.8
P10809_1015
18.1
P10809_1030
20.7
P10809_1049
38.8
P10809_1068
33.6
P10809_1085
15.8
P10809_1112
22.4
Naive CD8 T-cell nTPM: 28.7
Samples: 6
Max nTPM: 34.0
Min nTPM: 19.6
P10809_1016
19.6
P10809_1031
31.5
P10809_1050
34.0
P10809_1069
33.6
P10809_1087
32.2
P10809_1110
21.3
T-reg nTPM: 44.9
Samples: 6
Max nTPM: 73.9
Min nTPM: 27.7
P10809_1018
31.6
P10809_1037
54.2
P10809_1056
73.9
P10809_1075
41.8
P10809_1094
40.3
P10809_1106
27.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.6
Samples: 4
Max nTPM: 100.2
Min nTPM: 41.1
RHH5202_R3573
100.2
RHH5230_R3602
87.1
RHH5259_R3631
41.1
RHH5288_R3660
74.0
Effector memory CD8 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 160.8
Min nTPM: 83.4
RHH5203_R3574
83.4
RHH5231_R3603
160.8
RHH5260_R3632
96.2
RHH5289_R3661
90.6
MAIT T-cell nTPM: 88.4
Samples: 4
Max nTPM: 137.5
Min nTPM: 70.0
RHH5233_R3605
137.5
RHH5205_R3576
72.6
RHH5262_R3634
73.3
RHH5297_R3663
70.0
Memory CD4 T-cell TFH nTPM: 68.8
Samples: 4
Max nTPM: 103.9
Min nTPM: 55.8
RHH5300_R3666
56.3
RHH5236_R3608
103.9
RHH5265_R3637
59.3
RHH5208_R3579
55.8
Memory CD4 T-cell Th1 nTPM: 67.4
Samples: 4
Max nTPM: 80.8
Min nTPM: 61.4
RHH5210_R3581
63.3
RHH5302_R3668
61.4
RHH5238_R3610
80.8
RHH5267_R3639
64.0
Memory CD4 T-cell Th1/Th17 nTPM: 81.8
Samples: 4
Max nTPM: 103.0
Min nTPM: 64.9
RHH5303_R3669
84.6
RHH5211_R3582
64.9
RHH5239_R3611
103.0
RHH5268_R3640
74.8
Memory CD4 T-cell Th17 nTPM: 85.5
Samples: 4
Max nTPM: 123.1
Min nTPM: 41.8
RHH5304_R3670
84.8
RHH5212_R3583
92.1
RHH5240_R3612
123.1
RHH5269_R3641
41.8
Memory CD4 T-cell Th2 nTPM: 66.5
Samples: 4
Max nTPM: 73.3
Min nTPM: 55.7
RHH5305_R3671
66.3
RHH5213_R3584
70.8
RHH5241_R3613
73.3
RHH5270_R3642
55.7
Naive CD4 T-cell nTPM: 55.2
Samples: 4
Max nTPM: 65.2
Min nTPM: 35.6
RHH5306_R3672
62.1
RHH5214_R3585
57.7
RHH5242_R3614
65.2
RHH5271_R3643
35.6
Naive CD8 T-cell nTPM: 64.6
Samples: 4
Max nTPM: 92.5
Min nTPM: 44.8
RHH5201_R3572
72.7
RHH5229_R3601
92.5
RHH5258_R3630
48.5
RHH5287_R3659
44.8
Non-Vd2 gdTCR nTPM: 97.9
Samples: 4
Max nTPM: 123.3
Min nTPM: 76.7
RHH5235_R3607
123.3
RHH5264_R3636
84.0
RHH5207_R3578
107.6
RHH5299_R3665
76.7
T-reg nTPM: 58.8
Samples: 4
Max nTPM: 71.6
Min nTPM: 50.7
RHH5301_R3667
52.8
RHH5237_R3609
71.6
RHH5266_R3638
50.7
RHH5209_R3580
59.9
Terminal effector memory CD4 T-cell nTPM: 77.0
Samples: 2
Max nTPM: 90.1
Min nTPM: 63.9
RHH5243_R3615
90.1
RHH5272_R3644
63.9
Terminal effector memory CD8 T-cell nTPM: 100.6
Samples: 4
Max nTPM: 135.2
Min nTPM: 84.4
RHH5232_R3604
135.2
RHH5204_R3575
84.4
RHH5261_R3633
96.9
RHH5296_R3662
85.9
Vd2 gdTCR nTPM: 78.4
Samples: 4
Max nTPM: 101.1
Min nTPM: 54.5
RHH5234_R3606
77.3
RHH5206_R3577
80.7
RHH5263_R3635
101.1
RHH5298_R3664
54.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
