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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.4
nTPM
Monaco:
82.4
nTPM
Schmiedel:
101.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.4
HPA sample
nTPM
gdT-cell nTPM: 29.9
Samples: 6
Max nTPM: 37.2
Min nTPM: 11.4
P10809_1007
30.7
P10809_1022
28.1
P10809_1041
37.2
P10809_1060
11.4
P10809_1077
36.5
P10809_1098
35.3
MAIT T-cell nTPM: 42.5
Samples: 6
Max nTPM: 65.9
Min nTPM: 26.5
P10809_1006
45.6
P10809_1024
26.5
P10809_1043
29.3
P10809_1062
27.7
P10809_1083
65.9
P10809_1097
59.7
Memory CD4 T-cell nTPM: 29.2
Samples: 6
Max nTPM: 35.9
Min nTPM: 15.0
P10809_1014
35.9
P10809_1026
33.6
P10809_1045
24.9
P10809_1064
34.5
P10809_1086
31.5
P10809_1113
15.0
Memory CD8 T-cell nTPM: 36.3
Samples: 5
Max nTPM: 46.0
Min nTPM: 30.6
P10809_1012
37.7
P10809_1027
35.0
P10809_1046
30.6
P10809_1065
32.3
P10809_1111
46.0
Naive CD4 T-cell nTPM: 35.7
Samples: 6
Max nTPM: 42.3
Min nTPM: 28.0
P10809_1015
42.3
P10809_1030
35.7
P10809_1049
28.0
P10809_1068
40.5
P10809_1085
38.2
P10809_1112
29.3
Naive CD8 T-cell nTPM: 29.5
Samples: 6
Max nTPM: 41.0
Min nTPM: 20.1
P10809_1016
41.0
P10809_1031
26.1
P10809_1050
30.1
P10809_1069
35.1
P10809_1087
20.1
P10809_1110
24.5
T-reg nTPM: 19.5
Samples: 6
Max nTPM: 26.4
Min nTPM: 11.2
P10809_1018
19.0
P10809_1037
20.7
P10809_1056
26.4
P10809_1075
23.7
P10809_1094
11.2
P10809_1106
15.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.0
Samples: 4
Max nTPM: 46.1
Min nTPM: 9.1
RHH5202_R3573
9.1
RHH5230_R3602
46.1
RHH5259_R3631
42.6
RHH5288_R3660
26.0
Effector memory CD8 T-cell nTPM: 50.7
Samples: 4
Max nTPM: 74.8
Min nTPM: 13.2
RHH5203_R3574
63.8
RHH5231_R3603
74.8
RHH5260_R3632
50.8
RHH5289_R3661
13.2
MAIT T-cell nTPM: 71.5
Samples: 4
Max nTPM: 108.5
Min nTPM: 10.5
RHH5233_R3605
10.5
RHH5205_R3576
60.8
RHH5262_R3634
108.5
RHH5297_R3663
106.3
Memory CD4 T-cell TFH nTPM: 43.5
Samples: 4
Max nTPM: 60.3
Min nTPM: 5.9
RHH5300_R3666
51.7
RHH5236_R3608
60.3
RHH5265_R3637
56.2
RHH5208_R3579
5.9
Memory CD4 T-cell Th1 nTPM: 47.5
Samples: 4
Max nTPM: 58.8
Min nTPM: 37.3
RHH5210_R3581
46.7
RHH5302_R3668
58.8
RHH5238_R3610
37.3
RHH5267_R3639
47.0
Memory CD4 T-cell Th1/Th17 nTPM: 43.5
Samples: 4
Max nTPM: 71.8
Min nTPM: 7.5
RHH5303_R3669
7.5
RHH5211_R3582
71.8
RHH5239_R3611
25.2
RHH5268_R3640
69.4
Memory CD4 T-cell Th17 nTPM: 37.1
Samples: 4
Max nTPM: 76.1
Min nTPM: 4.1
RHH5304_R3670
21.2
RHH5212_R3583
76.1
RHH5240_R3612
4.1
RHH5269_R3641
47.0
Memory CD4 T-cell Th2 nTPM: 54.6
Samples: 4
Max nTPM: 89.1
Min nTPM: 13.5
RHH5305_R3671
67.8
RHH5213_R3584
89.1
RHH5241_R3613
13.5
RHH5270_R3642
47.9
Naive CD4 T-cell nTPM: 57.0
Samples: 4
Max nTPM: 66.1
Min nTPM: 48.6
RHH5306_R3672
62.1
RHH5214_R3585
66.1
RHH5242_R3614
51.2
RHH5271_R3643
48.6
Naive CD8 T-cell nTPM: 32.3
Samples: 4
Max nTPM: 52.2
Min nTPM: 10.5
RHH5201_R3572
10.5
RHH5229_R3601
29.1
RHH5258_R3630
52.2
RHH5287_R3659
37.3
Non-Vd2 gdTCR nTPM: 27.0
Samples: 4
Max nTPM: 53.7
Min nTPM: 4.3
RHH5235_R3607
37.9
RHH5264_R3636
12.1
RHH5207_R3578
4.3
RHH5299_R3665
53.7
T-reg nTPM: 46.2
Samples: 4
Max nTPM: 61.3
Min nTPM: 36.9
RHH5301_R3667
61.3
RHH5237_R3609
44.0
RHH5266_R3638
42.5
RHH5209_R3580
36.9
Terminal effector memory CD4 T-cell nTPM: 29.2
Samples: 2
Max nTPM: 38.8
Min nTPM: 19.6
RHH5243_R3615
38.8
RHH5272_R3644
19.6
Terminal effector memory CD8 T-cell nTPM: 37.3
Samples: 4
Max nTPM: 73.0
Min nTPM: 12.8
RHH5232_R3604
12.8
RHH5204_R3575
73.0
RHH5261_R3633
47.6
RHH5296_R3662
15.6
Vd2 gdTCR nTPM: 82.5
Samples: 4
Max nTPM: 96.0
Min nTPM: 62.7
RHH5234_R3606
93.7
RHH5206_R3577
77.4
RHH5263_R3635
62.7
RHH5298_R3664
96.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
