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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.0
nTPM
Monaco:
223.2
nTPM
Schmiedel:
84.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.0
HPA sample
nTPM
gdT-cell nTPM: 31.5
Samples: 6
Max nTPM: 40.1
Min nTPM: 22.5
P10809_1007
30.0
P10809_1022
40.1
P10809_1041
22.5
P10809_1060
27.3
P10809_1077
38.3
P10809_1098
30.7
MAIT T-cell nTPM: 37.5
Samples: 6
Max nTPM: 46.3
Min nTPM: 21.0
P10809_1006
46.3
P10809_1024
41.4
P10809_1043
21.0
P10809_1062
35.2
P10809_1083
45.6
P10809_1097
35.4
Memory CD4 T-cell nTPM: 33.1
Samples: 6
Max nTPM: 38.4
Min nTPM: 26.4
P10809_1014
38.4
P10809_1026
28.3
P10809_1045
26.4
P10809_1064
29.1
P10809_1086
37.8
P10809_1113
38.3
Memory CD8 T-cell nTPM: 33.9
Samples: 5
Max nTPM: 42.4
Min nTPM: 24.3
P10809_1012
42.4
P10809_1027
33.0
P10809_1046
24.3
P10809_1065
30.8
P10809_1111
39.1
Naive CD4 T-cell nTPM: 33.6
Samples: 6
Max nTPM: 52.0
Min nTPM: 14.3
P10809_1015
52.0
P10809_1030
32.6
P10809_1049
14.3
P10809_1068
39.0
P10809_1085
31.4
P10809_1112
32.2
Naive CD8 T-cell nTPM: 34.4
Samples: 6
Max nTPM: 46.1
Min nTPM: 26.6
P10809_1016
40.1
P10809_1031
32.2
P10809_1050
26.6
P10809_1069
28.4
P10809_1087
46.1
P10809_1110
33.1
T-reg nTPM: 39.0
Samples: 6
Max nTPM: 50.1
Min nTPM: 23.9
P10809_1018
45.0
P10809_1037
41.5
P10809_1056
23.9
P10809_1075
50.1
P10809_1094
33.6
P10809_1106
39.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
223.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 174.1
Samples: 4
Max nTPM: 199.8
Min nTPM: 145.8
RHH5202_R3573
199.8
RHH5230_R3602
158.8
RHH5259_R3631
191.8
RHH5288_R3660
145.8
Effector memory CD8 T-cell nTPM: 223.2
Samples: 4
Max nTPM: 244.6
Min nTPM: 205.7
RHH5203_R3574
230.1
RHH5231_R3603
212.4
RHH5260_R3632
244.6
RHH5289_R3661
205.7
MAIT T-cell nTPM: 200.9
Samples: 4
Max nTPM: 225.7
Min nTPM: 176.5
RHH5233_R3605
211.2
RHH5205_R3576
225.7
RHH5262_R3634
190.0
RHH5297_R3663
176.5
Memory CD4 T-cell TFH nTPM: 186.7
Samples: 4
Max nTPM: 242.0
Min nTPM: 139.3
RHH5300_R3666
139.3
RHH5236_R3608
192.1
RHH5265_R3637
173.4
RHH5208_R3579
242.0
Memory CD4 T-cell Th1 nTPM: 177.7
Samples: 4
Max nTPM: 187.9
Min nTPM: 153.4
RHH5210_R3581
187.9
RHH5302_R3668
153.4
RHH5238_R3610
182.7
RHH5267_R3639
186.8
Memory CD4 T-cell Th1/Th17 nTPM: 210.2
Samples: 4
Max nTPM: 224.3
Min nTPM: 192.6
RHH5303_R3669
192.6
RHH5211_R3582
224.3
RHH5239_R3611
203.9
RHH5268_R3640
220.1
Memory CD4 T-cell Th17 nTPM: 217.9
Samples: 4
Max nTPM: 277.3
Min nTPM: 173.5
RHH5304_R3670
173.5
RHH5212_R3583
202.1
RHH5240_R3612
277.3
RHH5269_R3641
218.5
Memory CD4 T-cell Th2 nTPM: 191.4
Samples: 4
Max nTPM: 214.2
Min nTPM: 162.3
RHH5305_R3671
162.3
RHH5213_R3584
214.2
RHH5241_R3613
205.4
RHH5270_R3642
183.5
Naive CD4 T-cell nTPM: 183.5
Samples: 4
Max nTPM: 198.6
Min nTPM: 144.4
RHH5306_R3672
144.4
RHH5214_R3585
193.8
RHH5242_R3614
197.1
RHH5271_R3643
198.6
Naive CD8 T-cell nTPM: 165.8
Samples: 4
Max nTPM: 189.8
Min nTPM: 144.7
RHH5201_R3572
148.5
RHH5229_R3601
189.8
RHH5258_R3630
144.7
RHH5287_R3659
180.1
Non-Vd2 gdTCR nTPM: 204.5
Samples: 4
Max nTPM: 237.0
Min nTPM: 170.8
RHH5235_R3607
195.3
RHH5264_R3636
214.8
RHH5207_R3578
237.0
RHH5299_R3665
170.8
T-reg nTPM: 186.7
Samples: 4
Max nTPM: 219.1
Min nTPM: 136.9
RHH5301_R3667
136.9
RHH5237_R3609
219.1
RHH5266_R3638
182.0
RHH5209_R3580
208.6
Terminal effector memory CD4 T-cell nTPM: 202.4
Samples: 2
Max nTPM: 207.1
Min nTPM: 197.7
RHH5243_R3615
207.1
RHH5272_R3644
197.7
Terminal effector memory CD8 T-cell nTPM: 206.2
Samples: 4
Max nTPM: 239.5
Min nTPM: 173.4
RHH5232_R3604
219.3
RHH5204_R3575
192.7
RHH5261_R3633
239.5
RHH5296_R3662
173.4
Vd2 gdTCR nTPM: 179.8
Samples: 4
Max nTPM: 228.3
Min nTPM: 121.0
RHH5234_R3606
171.8
RHH5206_R3577
198.2
RHH5263_R3635
228.3
RHH5298_R3664
121.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
