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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
133.1
nTPM
Monaco:
91.1
nTPM
Schmiedel:
54.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.1
HPA sample
nTPM
gdT-cell nTPM: 88.4
Samples: 6
Max nTPM: 107.7
Min nTPM: 77.3
P10809_1007
77.6
P10809_1022
85.1
P10809_1041
77.3
P10809_1060
89.1
P10809_1077
107.7
P10809_1098
93.6
MAIT T-cell nTPM: 92.6
Samples: 6
Max nTPM: 102.4
Min nTPM: 81.0
P10809_1006
81.0
P10809_1024
88.1
P10809_1043
97.7
P10809_1062
87.2
P10809_1083
102.4
P10809_1097
99.3
Memory CD4 T-cell nTPM: 103.4
Samples: 6
Max nTPM: 115.9
Min nTPM: 92.3
P10809_1014
92.3
P10809_1026
106.7
P10809_1045
98.6
P10809_1064
100.2
P10809_1086
106.8
P10809_1113
115.9
Memory CD8 T-cell nTPM: 98.9
Samples: 5
Max nTPM: 116.0
Min nTPM: 71.7
P10809_1012
95.8
P10809_1027
71.7
P10809_1046
100.2
P10809_1065
110.8
P10809_1111
116.0
Naive CD4 T-cell nTPM: 87.7
Samples: 6
Max nTPM: 104.5
Min nTPM: 80.7
P10809_1015
81.9
P10809_1030
82.4
P10809_1049
93.0
P10809_1068
104.5
P10809_1085
83.5
P10809_1112
80.7
Naive CD8 T-cell nTPM: 97.0
Samples: 6
Max nTPM: 110.6
Min nTPM: 84.5
P10809_1016
97.5
P10809_1031
91.0
P10809_1050
89.2
P10809_1069
110.6
P10809_1087
109.2
P10809_1110
84.5
T-reg nTPM: 133.1
Samples: 6
Max nTPM: 159.6
Min nTPM: 106.3
P10809_1018
106.3
P10809_1037
148.5
P10809_1056
122.0
P10809_1075
119.3
P10809_1094
159.6
P10809_1106
143.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 60.2
Samples: 4
Max nTPM: 107.2
Min nTPM: 34.4
RHH5202_R3573
55.7
RHH5230_R3602
43.4
RHH5259_R3631
34.4
RHH5288_R3660
107.2
Effector memory CD8 T-cell nTPM: 50.6
Samples: 4
Max nTPM: 64.6
Min nTPM: 23.1
RHH5203_R3574
58.0
RHH5231_R3603
64.6
RHH5260_R3632
56.8
RHH5289_R3661
23.1
MAIT T-cell nTPM: 63.3
Samples: 4
Max nTPM: 81.8
Min nTPM: 47.7
RHH5233_R3605
81.8
RHH5205_R3576
48.3
RHH5262_R3634
47.7
RHH5297_R3663
75.3
Memory CD4 T-cell TFH nTPM: 71.4
Samples: 4
Max nTPM: 116.1
Min nTPM: 52.9
RHH5300_R3666
57.1
RHH5236_R3608
116.1
RHH5265_R3637
52.9
RHH5208_R3579
59.3
Memory CD4 T-cell Th1 nTPM: 75.9
Samples: 4
Max nTPM: 107.6
Min nTPM: 55.7
RHH5210_R3581
81.6
RHH5302_R3668
107.6
RHH5238_R3610
55.7
RHH5267_R3639
58.5
Memory CD4 T-cell Th1/Th17 nTPM: 68.0
Samples: 4
Max nTPM: 112.7
Min nTPM: 34.4
RHH5303_R3669
112.7
RHH5211_R3582
66.8
RHH5239_R3611
34.4
RHH5268_R3640
58.0
Memory CD4 T-cell Th17 nTPM: 54.3
Samples: 4
Max nTPM: 67.2
Min nTPM: 44.7
RHH5304_R3670
59.7
RHH5212_R3583
67.2
RHH5240_R3612
44.7
RHH5269_R3641
45.6
Memory CD4 T-cell Th2 nTPM: 57.9
Samples: 4
Max nTPM: 67.4
Min nTPM: 41.9
RHH5305_R3671
67.4
RHH5213_R3584
62.9
RHH5241_R3613
59.5
RHH5270_R3642
41.9
Naive CD4 T-cell nTPM: 70.0
Samples: 4
Max nTPM: 90.4
Min nTPM: 52.1
RHH5306_R3672
82.6
RHH5214_R3585
90.4
RHH5242_R3614
54.8
RHH5271_R3643
52.1
Naive CD8 T-cell nTPM: 56.7
Samples: 4
Max nTPM: 77.9
Min nTPM: 41.0
RHH5201_R3572
55.5
RHH5229_R3601
41.0
RHH5258_R3630
77.9
RHH5287_R3659
52.5
Non-Vd2 gdTCR nTPM: 70.5
Samples: 4
Max nTPM: 114.8
Min nTPM: 43.2
RHH5235_R3607
55.6
RHH5264_R3636
43.2
RHH5207_R3578
68.2
RHH5299_R3665
114.8
T-reg nTPM: 75.9
Samples: 4
Max nTPM: 103.1
Min nTPM: 57.9
RHH5301_R3667
103.1
RHH5237_R3609
76.6
RHH5266_R3638
57.9
RHH5209_R3580
65.9
Terminal effector memory CD4 T-cell nTPM: 56.6
Samples: 2
Max nTPM: 65.8
Min nTPM: 47.3
RHH5243_R3615
47.3
RHH5272_R3644
65.8
Terminal effector memory CD8 T-cell nTPM: 91.1
Samples: 4
Max nTPM: 179.9
Min nTPM: 54.0
RHH5232_R3604
74.6
RHH5204_R3575
179.9
RHH5261_R3633
54.0
RHH5296_R3662
55.9
Vd2 gdTCR nTPM: 90.0
Samples: 4
Max nTPM: 138.8
Min nTPM: 36.1
RHH5234_R3606
49.5
RHH5206_R3577
135.4
RHH5263_R3635
36.1
RHH5298_R3664
138.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
